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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ16A08_PFZ16A08, a Jack Russell Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ16A08_PFZ16A08

PFZ16A08_PFZ16A08 is a Jack Russell Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ16A08_PFZ16A08 in the atlas
About PFZ16A08_PFZ16A08

PFZ16A08_PFZ16A08 sits near the center of the Jack Russell Terrier cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ16A08_PFZ16A08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ16A08_PFZ16A08's. Click any of them to keep exploring.

  1. JRT_GT254_JRT_GT254 Jack Russell Terrier 19.18
  2. PFZ33A05_PFZ33A05 Jack Russell Terrier 20.85
  3. PFZ34B05_PFZ34B05 Jack Russell Terrier 20.96
  4. JRT_GT257_JRT_GT257 Jack Russell Terrier 20.98
  5. PFZ17E03_PFZ17E03 Jack Russell Terrier 21.01
PFZ16A08_PFZ16A08's breed

PFZ16A08_PFZ16A08 sits in the Jack Russell Terrier cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Jack Russell Terrier 84%
  2. Golden Retriever 9%
  3. Labrador Retriever 8%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Jack Russell Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 T/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.422
y 0.749
z 3.739
PCA-256 distance from breed centroid
19.30
Outlier percentile in breed
4
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ16A08_PFZ16A08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC69 z = -3.03
  • chr28:2,486,426 loading 0.0331
  • chr15:29,010,464 loading -0.0324
  • chr27:17,119,793 loading -0.0316
PC71 z = -2.65
  • chr22:1,808,281 loading 0.0402
  • chr22:2,157,682 loading 0.0366
  • chr22:2,072,452 loading 0.0364
PC72 z = -2.63
  • chr22:15,601,204 loading 0.0364
  • chr22:2,850,748 loading 0.0330
  • chr22:15,670,985 loading -0.0317
Ancestry reconstruction error: 0.46
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