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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ16B06_PFZ16B06, a Toy Poodle
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ16B06_PFZ16B06

PFZ16B06_PFZ16B06 is a Toy Poodle from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ16B06_PFZ16B06 in the atlas
About PFZ16B06_PFZ16B06

PFZ16B06_PFZ16B06 sits well inside the Toy Poodle cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ16B06_PFZ16B06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ16B06_PFZ16B06's. Click any of them to keep exploring.

  1. Pdl_GT340_Pdl_GT340 Poodle 19.85
  2. PFZ42G08_PFZ42G08 Toy Poodle 20.74
  3. PFZ32H02_PFZ32H02 Toy Poodle 20.93
  4. PFZ32H09_PFZ32H09 Toy Poodle 21.02
  5. PFZ16H01_PFZ16H01 Toy Poodle 21.03
PFZ16B06_PFZ16B06's breed

PFZ16B06_PFZ16B06 sits in the Toy Poodle cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Toy Poodle 82%
  2. Golden Retriever 9%
  3. Labrador Retriever 9%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Toy Poodle.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 A/A
LCORL A/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.314
y 0.542
z 0.312
PCA-256 distance from breed centroid
20.70
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ16B06_PFZ16B06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC122 z = -2.44
  • chr1:69,449,779 loading 0.0431
  • chr1:69,785,342 loading 0.0329
  • chr10:4,740,874 loading 0.0326
PC62 z = 2.28
  • chr22:2,157,682 loading 0.0652
  • chr22:2,367,358 loading 0.0634
  • chr22:2,271,992 loading 0.0625
PC135 z = 2.12
  • chr8:33,499,010 loading 0.0341
  • chr6:30,409,356 loading -0.0338
  • chr34:15,382,542 loading -0.0330
Ancestry reconstruction error: 0.45
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