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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ17C03_PFZ17C03, a Otterhound
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ17C03_PFZ17C03

PFZ17C03_PFZ17C03 is a Otterhound from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ17C03_PFZ17C03 in the atlas
About PFZ17C03_PFZ17C03

PFZ17C03_PFZ17C03 sits well inside the Otterhound cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ17C03_PFZ17C03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ17C03_PFZ17C03's. Click any of them to keep exploring.

  1. OH_33203_OH_33203 Otterhound 19.34
  2. PFZ36A05_PFZ36A05 Otterhound 20.11
  3. OH_5714_OH_5714 Otterhound 20.18
  4. PFZ16C07_PFZ16C07 Otterhound 21.23
  5. PFZ17H04_PFZ17H04 Otterhound 22.02
PFZ17C03_PFZ17C03's breed

PFZ17C03_PFZ17C03 sits in the Otterhound cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Otterhound 76%
  2. Golden Retriever 14%
  3. Labrador Retriever 9%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Otterhound.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 0.852
y 12.578
z 4.162
PCA-256 distance from breed centroid
45.12
Outlier percentile in breed
30
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ17C03_PFZ17C03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC47 z = 7.40
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
PC90 z = 7.24
  • chr22:398,599 loading 0.0377
  • chr29:27,583,617 loading -0.0367
  • chr22:25,742,519 loading -0.0349
PC95 z = 6.13
  • chr22:27,265,197 loading 0.0431
  • chr5:72,529,391 loading 0.0328
  • chr10:5,349,288 loading 0.0317
Ancestry reconstruction error: 0.56
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