Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ19E08_PFZ19E08, a English Springer Spaniel
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ19E08_PFZ19E08

PFZ19E08_PFZ19E08 is a English Springer Spaniel from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ19E08_PFZ19E08 in the atlas
About PFZ19E08_PFZ19E08

PFZ19E08_PFZ19E08 sits well inside the English Springer Spaniel cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ19E08_PFZ19E08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ19E08_PFZ19E08's. Click any of them to keep exploring.

  1. PFZ19F06_PFZ19F06 English Springer Spaniel 18.13
  2. PFZ19A06_PFZ19A06 English Springer Spaniel 18.73
  3. PFZ19C04_PFZ19C04 English Springer Spaniel 19.86
  4. PFZ19F11_PFZ19F11 English Springer Spaniel 20.08
  5. PFZ19E06_PFZ19E06 English Springer Spaniel 20.35
PFZ19E08_PFZ19E08's breed

PFZ19E08_PFZ19E08 sits in the English Springer Spaniel cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Springer Spaniel 79%
  2. Labrador Retriever 11%
  3. Golden Retriever 10%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: English Springer Spaniel.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 14.152
y -1.460
z 7.538
PCA-256 distance from breed centroid
26.66
Outlier percentile in breed
48
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ19E08_PFZ19E08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC230 z = 3.26
  • chr14:35,252,647 loading 0.0345
  • chr7:40,535,333 loading 0.0300
  • chr17:50,105,121 loading -0.0291
PC23 z = -2.89
  • chr35:14,154,465 loading 0.0292
  • chr12:39,598,521 loading 0.0284
  • chr13:8,570,429 loading -0.0283
PC26 z = 2.87
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
Ancestry reconstruction error: 0.43
Back to the Atlas →