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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ1A05_PFZ1A05, a Village Dog Peru Loreto
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ1A05_PFZ1A05

PFZ1A05_PFZ1A05 is labelled Village Dog Peru Loreto in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ1A05_PFZ1A05 in the atlas
About PFZ1A05_PFZ1A05

PFZ1A05_PFZ1A05 is a strong genetic outlier within the Village Dog Peru Loreto cluster - among the most distinctive examples of their breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ1A05_PFZ1A05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ1A05_PFZ1A05's. Click any of them to keep exploring.

  1. LE45_LE45 Village Dog Lebanon Beruit 24.02
  2. PFZ3F02_PFZ3F02 Village Dog Colombia 24.32
  3. PFZ43G02_PFZ43G02 Labrador Retriever 24.78
  4. PFZ38F03_PFZ38F03 Labrador Retriever 25.38
  5. PFZ2B06_PFZ2B06 Village Dog Peru Arequipa 25.69
PFZ1A05_PFZ1A05's breed

PFZ1A05_PFZ1A05's genome decomposes mostly into Labrador Retriever, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 72%
  2. Golden Retriever 28%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Peru Loreto.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.659
y 0.743
z 5.717
PCA-256 distance from breed centroid
25.91
Outlier percentile in breed
96
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ1A05_PFZ1A05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC79 z = 1.49
  • chr3:7,389,779 loading 0.0444
  • chr3:6,720,531 loading -0.0378
  • chr3:6,392,552 loading -0.0378
PC131 z = 1.39
  • chr12:40,003,687 loading 0.0371
  • chr34:1,655,411 loading -0.0356
  • chr12:4,421,359 loading -0.0347
PC222 z = 1.37
  • chr12:60,458,843 loading 0.0369
  • chr13:14,089,127 loading 0.0363
  • chr34:29,222,122 loading -0.0309
Ancestry reconstruction error: 0.84
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