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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ1E12_PFZ1E12, a Peruvian Inca Orchid
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ1E12_PFZ1E12

PFZ1E12_PFZ1E12 is a Peruvian Inca Orchid from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ1E12_PFZ1E12 in the atlas
About PFZ1E12_PFZ1E12

PFZ1E12_PFZ1E12 sits well inside the Peruvian Inca Orchid cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ1E12_PFZ1E12's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ1E12_PFZ1E12's. Click any of them to keep exploring.

  1. PFZ2G09_PFZ2G09 Village Dog Peru Loreto 21.89
  2. 8233_8233 Village Dog Belize 22.10
  3. PFZ2H01_PFZ2H01 Village Dog Peru Puno 22.18
  4. PFZ1C02_PFZ1C02 Village Dog Peru Puno 22.28
  5. PFZ2E10_PFZ2E10 Village Dog Peru Ica 22.51
PFZ1E12_PFZ1E12's breed

PFZ1E12_PFZ1E12 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 59%
  2. Labrador Retriever 41%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Peruvian Inca Orchid.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 T/C
MC1R T/T
Ear set
MSRB3 G/G
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.536
y 1.465
z 2.029
PCA-256 distance from breed centroid
36.75
Outlier percentile in breed
48
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ1E12_PFZ1E12 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC237 z = -1.77
  • chr18:10,316,807 loading 0.0412
  • chr18:49,993,975 loading -0.0328
  • chr4:32,494,543 loading 0.0323
PC110 z = -1.63
  • chr25:1,742,133 loading 0.0401
  • chr28:2,607,542 loading 0.0393
  • chr25:1,819,027 loading 0.0392
PC192 z = -1.63
  • chr25:28,817,053 loading 0.0428
  • chr25:4,418,784 loading 0.0393
  • chr25:26,660,651 loading 0.0386
Ancestry reconstruction error: 0.58
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