Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ1F07_PFZ1F07, a Taiwanese Mountain Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ1F07_PFZ1F07

PFZ1F07_PFZ1F07 is a Taiwanese Mountain Dog from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ1F07_PFZ1F07 in the atlas
About PFZ1F07_PFZ1F07
  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ1F07_PFZ1F07's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ1F07_PFZ1F07's. Click any of them to keep exploring.

  1. 7925_7925 Mix 19.94
  2. C_CRD_C_CRD3 Chinese Rural Dog 23.84
  3. C_CRD_C_CRD10 Chinese Rural Dog 24.74
  4. MN12_MN12 Village Dog Mongolia 25.01
  5. C_CRD_C_CRD8 Chinese Rural Dog 25.34
PFZ1F07_PFZ1F07's breed

PFZ1F07_PFZ1F07 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Taiwanese Mountain Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.587
y 6.168
z -0.532
Top-3 principal components by |z|

The 3 PCs on which PFZ1F07_PFZ1F07 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC11 z = 2.51
  • chr6:60,987,558 loading 0.0302
  • chr18:25,790,852 loading 0.0293
  • chr14:14,074,192 loading -0.0293
PC231 z = 1.54
  • chr23:12,238,858 loading 0.0365
  • chr30:3,110,542 loading 0.0349
  • chr26:5,761,213 loading -0.0320
PC26 z = 1.53
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
Ancestry reconstruction error: 0.48
Back to the Atlas →