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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ20F08_PFZ20F08, a Gordon Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ20F08_PFZ20F08

PFZ20F08_PFZ20F08 is a Gordon Setter from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ20F08_PFZ20F08 in the atlas
About PFZ20F08_PFZ20F08

PFZ20F08_PFZ20F08 sits at the edge of the Gordon Setter cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ20F08_PFZ20F08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ20F08_PFZ20F08's. Click any of them to keep exploring.

  1. PFZ20E08_PFZ20E08 Gordon Setter 11.94
  2. PFZ20D08_PFZ20D08 Gordon Setter 15.47
  3. PFZ21E01_PFZ21E01 Gordon Setter 17.59
  4. PFZ21D01_PFZ21D01 Gordon Setter 18.81
  5. PFZ5B09_PFZ5B09 Gordon Setter 18.99
PFZ20F08_PFZ20F08's breed

PFZ20F08_PFZ20F08 sits in the Gordon Setter cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Gordon Setter 86%
  2. Golden Retriever 7%
  3. Labrador Retriever 7%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Gordon Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.403
y 4.430
z -7.333
PCA-256 distance from breed centroid
40.63
Outlier percentile in breed
73
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ20F08_PFZ20F08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC55 z = 9.84
  • chr24:21,414,064 loading 0.0303
  • chr22:46,871,951 loading -0.0285
  • chr34:8,498,060 loading -0.0284
PC54 z = -7.64
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
PC56 z = -6.00
  • chr4:50,564,575 loading 0.0345
  • chr20:9,086,763 loading 0.0319
  • chr15:1,031,002 loading -0.0297
Ancestry reconstruction error: 0.52
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