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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ21G06_PFZ21G06, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ21G06_PFZ21G06

PFZ21G06_PFZ21G06 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ21G06_PFZ21G06 in the atlas
About PFZ21G06_PFZ21G06

PFZ21G06_PFZ21G06 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ21G06_PFZ21G06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ21G06_PFZ21G06's. Click any of them to keep exploring.

  1. PILOT_grls43D0DWTT Golden Retriever 29.32
  2. Oldies_grlscca98e33 Golden Retriever 29.52
  3. GRLS_grls56OU2P Golden Retriever 29.61
  4. GRLS_grls7XFLIQOO Golden Retriever 29.68
  5. GRLS_grlsYWX7H3EE Golden Retriever 29.83
PFZ21G06_PFZ21G06's breed

PFZ21G06_PFZ21G06 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 76%
  2. Labrador Retriever 24%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 T/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.501
y 11.432
z 8.206
PCA-256 distance from breed centroid
31.03
Outlier percentile in breed
32
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ21G06_PFZ21G06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = -3.38
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC156 z = 2.28
  • chr24:4,330,562 loading 0.0395
  • chr1:76,396,561 loading -0.0378
  • chr24:4,851,124 loading -0.0357
PC137 z = 2.16
  • chr22:28,989,668 loading 0.0410
  • chr22:28,783,539 loading -0.0357
  • chr19:1,162,032 loading 0.0337
Ancestry reconstruction error: 0.58
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