Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ22F12_PFZ22F12, a English Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ22F12_PFZ22F12

PFZ22F12_PFZ22F12 is a English Setter from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ22F12_PFZ22F12 in the atlas
About PFZ22F12_PFZ22F12

PFZ22F12_PFZ22F12 sits at the edge of the English Setter cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ22F12_PFZ22F12's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ22F12_PFZ22F12's. Click any of them to keep exploring.

  1. PFZ22D11_PFZ22D11 English Setter 9.77
  2. PFZ21E03_PFZ21E03 English Setter 13.35
  3. PFZ21E02_PFZ21E02 English Setter 13.64
  4. PFZ22F09_PFZ22F09 English Setter 13.78
  5. PFZ21B05_PFZ21B05 English Setter 14.78
PFZ22F12_PFZ22F12's breed

PFZ22F12_PFZ22F12 sits in the English Setter cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. English Setter 88%
  2. Labrador Retriever 6%
  3. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: English Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 0.677
y -2.045
z -3.568
PCA-256 distance from breed centroid
25.24
Outlier percentile in breed
50
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ22F12_PFZ22F12 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC9 z = -8.45
  • chr3:66,503,138 loading 0.0243
  • chr29:24,433,584 loading 0.0237
  • chr21:33,291,005 loading 0.0234
PC75 z = 3.34
  • chr24:13,342,362 loading 0.0352
  • chr3:60,753,270 loading -0.0318
  • chr6:19,557,398 loading 0.0285
PC7 z = 2.72
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
Ancestry reconstruction error: 0.26
Back to the Atlas →