Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ23G09_PFZ23G09, a Boxer
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ23G09_PFZ23G09

PFZ23G09_PFZ23G09 is a Boxer from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ23G09_PFZ23G09 in the atlas
About PFZ23G09_PFZ23G09

PFZ23G09_PFZ23G09 is a notable Boxer - distinctive within the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ23G09_PFZ23G09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ23G09_PFZ23G09's. Click any of them to keep exploring.

  1. PFZ36D06_PFZ36D06 Boxer 10.42
  2. PFZ36C06_PFZ36C06 Boxer 11.05
  3. PFZ36B06_PFZ36B06 Boxer 11.47
  4. cHD11_125_cHD11_125 Boxer 19.92
  5. PFZ24E12_PFZ24E12 Boxer 20.94
PFZ23G09_PFZ23G09's breed

PFZ23G09_PFZ23G09 sits in the Boxer cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Boxer 87%
  2. Labrador Retriever 7%
  3. Golden Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Boxer.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.695
y 0.264
z -1.142
PCA-256 distance from breed centroid
25.58
Outlier percentile in breed
80
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ23G09_PFZ23G09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC6 z = -7.27
  • chr21:49,939,565 loading 0.0237
  • chr6:69,385,669 loading 0.0231
  • chr30:13,959,767 loading -0.0230
PC7 z = -3.57
  • chr17:45,883,815 loading 0.0290
  • chr17:6,654,333 loading 0.0283
  • chr34:27,183,296 loading 0.0282
PC175 z = 3.31
  • chr4:78,342,208 loading 0.0332
  • chr20:38,715,188 loading 0.0330
  • chr20:38,805,558 loading 0.0328
Ancestry reconstruction error: 0.25
Back to the Atlas →