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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ26C09_PFZ26C09, a Mix
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ26C09_PFZ26C09

PFZ26C09_PFZ26C09 is a Mix from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ26C09_PFZ26C09 in the atlas
About PFZ26C09_PFZ26C09

PFZ26C09_PFZ26C09 sits at the edge of the Mix cluster but still well within it.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ26C09_PFZ26C09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ26C09_PFZ26C09's. Click any of them to keep exploring.

  1. PFZ27E09_PFZ27E09 Mix 14.80
  2. PFZ25H10_PFZ25H10 Mix 16.91
  3. PFZ26B10_PFZ26B10 Mix 17.01
  4. PFZ26G08_PFZ26G08 Mix 19.88
  5. PFZ25C12_PFZ25C12 Mix 20.10
PFZ26C09_PFZ26C09's breed

PFZ26C09_PFZ26C09 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 67%
  2. Golden Retriever 33%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Mix.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.612
y 1.222
z 3.095
PCA-256 distance from breed centroid
46.51
Outlier percentile in breed
54
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ26C09_PFZ26C09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC57 z = -4.34
  • chr22:902,803 loading 0.0514
  • chr22:1,384,447 loading 0.0453
  • chr22:2,157,682 loading -0.0450
PC36 z = 3.69
  • chr18:29,956,251 loading 0.0345
  • chr26:19,556,698 loading 0.0316
  • chr21:15,780,220 loading -0.0288
PC32 z = -3.46
  • chr23:20,231,163 loading 0.0295
  • chr22:42,651,822 loading -0.0294
  • chr27:39,738,665 loading 0.0291
Ancestry reconstruction error: 0.86
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