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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ27F09_PFZ27F09, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ27F09_PFZ27F09

PFZ27F09_PFZ27F09 is a Labrador Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ27F09_PFZ27F09 in the atlas
About PFZ27F09_PFZ27F09

PFZ27F09_PFZ27F09 is a notable Labrador Retriever - distinctive within the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ27F09_PFZ27F09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ27F09_PFZ27F09's. Click any of them to keep exploring.

  1. PFZ15G10_PFZ15G10 Labrador Retriever 18.69
  2. PFZ25C03_PFZ25C03 Labrador Retriever 19.23
  3. PFZ26G11_PFZ26G11 Labrador Retriever 19.40
  4. PFZ11C04_PFZ11C04 Labrador Retriever 19.49
  5. PFZ11F01_PFZ11F01 Labrador Retriever 20.47
PFZ27F09_PFZ27F09's breed

PFZ27F09_PFZ27F09 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.408
y 0.049
z 5.136
PCA-256 distance from breed centroid
64.45
Outlier percentile in breed
77
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ27F09_PFZ27F09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC128 z = -5.23
  • chr28:1,724,663 loading 0.0466
  • chr28:1,967,976 loading -0.0397
  • chr28:2,486,426 loading -0.0376
PC125 z = 4.41
  • chr26:7,428,484 loading 0.0355
  • chr21:3,789,149 loading 0.0351
  • chr4:1,268,630 loading 0.0319
PC137 z = 4.09
  • chr22:28,989,668 loading 0.0410
  • chr22:28,783,539 loading -0.0357
  • chr19:1,162,032 loading 0.0337
Ancestry reconstruction error: 0.91 (high - dog sits between cluster centroids)
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