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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ29B05_PFZ29B05, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ29B05_PFZ29B05

PFZ29B05_PFZ29B05 is a Labrador Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ29B05_PFZ29B05 in the atlas
About PFZ29B05_PFZ29B05

PFZ29B05_PFZ29B05 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ29B05_PFZ29B05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ29B05_PFZ29B05's. Click any of them to keep exploring.

  1. PFZ37E12_PFZ37E12 Labrador Retriever 23.18
  2. 3164_3164 Labrador Retriever 23.81
  3. PFZ4G09_PFZ4G09 Labrador Retriever 23.83
  4. 4103_4103 Labrador Retriever 23.91
  5. PFZ32E08_PFZ32E08 Labrador Retriever 23.97
PFZ29B05_PFZ29B05's breed

PFZ29B05_PFZ29B05 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 74%
  2. Golden Retriever 26%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.214
y 0.475
z 5.796
PCA-256 distance from breed centroid
48.77
Outlier percentile in breed
10
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ29B05_PFZ29B05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC36 z = -2.10
  • chr18:29,956,251 loading 0.0345
  • chr26:19,556,698 loading 0.0316
  • chr21:15,780,220 loading -0.0288
PC139 z = -1.95
  • chr11:59,916,847 loading 0.0380
  • chr1:13,688,590 loading -0.0336
  • chr9:44,269,754 loading 0.0311
PC233 z = -1.93
  • chr16:48,608,303 loading 0.0348
  • chr13:24,655,299 loading -0.0330
  • chr23:1,734,032 loading 0.0330
Ancestry reconstruction error: 0.87
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