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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ29C03_PFZ29C03, a Papillon
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ29C03_PFZ29C03

PFZ29C03_PFZ29C03 is a Papillon from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ29C03_PFZ29C03 in the atlas
About PFZ29C03_PFZ29C03

PFZ29C03_PFZ29C03 sits well inside the Papillon cluster - a fairly typical example.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ29C03_PFZ29C03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ29C03_PFZ29C03's. Click any of them to keep exploring.

  1. PFZ29H01_PFZ29H01 Papillon 15.83
  2. PFZ29G01_PFZ29G01 Papillon 16.54
  3. PFZ29A02_PFZ29A02 Papillon 16.61
  4. PFZ6H06_PFZ6H06 Papillon 18.46
  5. PFZ29G02_PFZ29G02 Papillon 18.55
PFZ29C03_PFZ29C03's breed

PFZ29C03_PFZ29C03 sits in the Papillon cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Papillon 86%
  2. Golden Retriever 7%
  3. Labrador Retriever 7%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Papillon.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -0.702
y 13.748
z 8.512
PCA-256 distance from breed centroid
19.11
Outlier percentile in breed
46
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ29C03_PFZ29C03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC82 z = 6.93
  • chr1:68,097,128 loading 0.0396
  • chr1:69,785,342 loading -0.0385
  • chr1:70,040,058 loading 0.0383
PC83 z = -6.17
  • chr4:1,519,291 loading 0.0346
  • chr4:1,791,116 loading 0.0333
  • chr4:1,268,630 loading 0.0330
PC80 z = -4.87
  • chr22:4,235,154 loading 0.0445
  • chr22:1,892,165 loading 0.0429
  • chr22:1,969,643 loading 0.0425
Ancestry reconstruction error: 0.25
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