Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ2F03_PFZ2F03, a Village Dog Peru Cusco
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ2F03_PFZ2F03

PFZ2F03_PFZ2F03 is labelled Village Dog Peru Cusco in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ2F03_PFZ2F03 in the atlas
About PFZ2F03_PFZ2F03

PFZ2F03_PFZ2F03 sits near the center of the Village Dog Peru Cusco cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ2F03_PFZ2F03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ2F03_PFZ2F03's. Click any of them to keep exploring.

  1. PFZ30B01_PFZ30B01 Village Dog Peru Puno 18.43
  2. PFZ2A10_PFZ2A10 Village Dog Peru Cusco 18.96
  3. PFZ2G10_PFZ2G10 Village Dog Peru Loreto 19.00
  4. PFZ1H12_PFZ1H12 Village Dog Peru Cusco 19.03
  5. PFZ2F08_PFZ2F08 Village Dog Peru Loreto 19.21
PFZ2F03_PFZ2F03's breed

PFZ2F03_PFZ2F03's genome decomposes mostly into German Shepherd, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 74%
  2. Golden Retriever 26%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Peru Cusco.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.432
y 1.489
z 1.740
PCA-256 distance from breed centroid
13.29
Outlier percentile in breed
4
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ2F03_PFZ2F03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC152 z = -1.50
  • chr25:28,621,324 loading 0.0364
  • chr20:11,911,649 loading 0.0323
  • chr20:7,517,267 loading -0.0311
PC197 z = 1.44
  • chr7:40,629,884 loading 0.0367
  • chr7:40,535,333 loading 0.0324
  • chr18:50,696,547 loading 0.0323
PC129 z = 1.33
  • chr9:12,031,144 loading 0.0367
  • chr13:1,840,654 loading -0.0344
  • chr9:14,628,871 loading -0.0343
Ancestry reconstruction error: 0.63
Back to the Atlas →