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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ2H04_PFZ2H04, a Village Dog Peru Puno
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ2H04_PFZ2H04

PFZ2H04_PFZ2H04 is labelled Village Dog Peru Puno in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ2H04_PFZ2H04 in the atlas
About PFZ2H04_PFZ2H04

PFZ2H04_PFZ2H04 sits well inside the Village Dog Peru Puno cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ2H04_PFZ2H04's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ2H04_PFZ2H04's. Click any of them to keep exploring.

  1. PFZ2F07_PFZ2F07 Village Dog Peru Puno 18.00
  2. PFZ2H01_PFZ2H01 Village Dog Peru Puno 19.40
  3. PFZ1A02_PFZ1A02 Village Dog Peru Puno 19.51
  4. PFZ2G11_PFZ2G11 Village Dog Peru Loreto 19.92
  5. PFZ2G04_PFZ2G04 Village Dog Peru Cusco 20.29
PFZ2H04_PFZ2H04's breed

PFZ2H04_PFZ2H04's genome decomposes mostly into Golden Retriever, with additional weight on Labrador Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 59%
  2. Labrador Retriever 41%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Peru Puno.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.530
y 1.349
z 1.837
PCA-256 distance from breed centroid
15.79
Outlier percentile in breed
41
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ2H04_PFZ2H04 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC95 z = -1.66
  • chr22:27,265,197 loading 0.0431
  • chr5:72,529,391 loading 0.0328
  • chr10:5,349,288 loading 0.0317
PC180 z = 1.66
  • chr25:3,195,036 loading 0.0485
  • chr25:4,418,784 loading -0.0459
  • chr25:3,349,555 loading 0.0401
PC219 z = 1.49
  • chr11:18,600,601 loading 0.0312
  • chr14:14,201,384 loading 0.0302
  • chr3:6,077,116 loading -0.0298
Ancestry reconstruction error: 0.67
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