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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ30A03_PFZ30A03
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ30A03_PFZ30A03

PFZ30A03_PFZ30A03 is a research dog from the Hayward2016 cohort. They weren't given a breed label - they're one of the dogs that helps the atlas understand what falls between breeds.

See PFZ30A03_PFZ30A03 in the atlas
About PFZ30A03_PFZ30A03
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ30A03_PFZ30A03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ30A03_PFZ30A03's. Click any of them to keep exploring.

  1. PFZ18A02_PFZ18A02 Labrador Retriever 1.08
  2. PFZ42B02_PFZ42B02 Labrador Retriever 17.11
  3. PFZ1F03_PFZ1F03 Labrador Retriever 17.59
  4. 1356_1356 Labrador Retriever 29.83
  5. 2973_2973 Labrador Retriever 31.80
PFZ30A03_PFZ30A03's breed

PFZ30A03_PFZ30A03's genome decomposes mostly into Labrador Retriever, with additional weight on Golden Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 77%
  2. Golden Retriever 23%
Source

From the CanVAS (Hayward2016 cohort) .

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/C
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.028
y 0.599
z 8.200
Top-3 principal components by |z|

The 3 PCs on which PFZ30A03_PFZ30A03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC125 z = 5.86
  • chr26:7,428,484 loading 0.0355
  • chr21:3,789,149 loading 0.0351
  • chr4:1,268,630 loading 0.0319
PC138 z = 4.62
  • chr15:23,130,452 loading 0.0401
  • chr28:1,724,663 loading 0.0367
  • chr15:42,263,341 loading 0.0350
PC116 z = -4.39
  • chr21:8,227,069 loading 0.0376
  • chr16:47,900,123 loading 0.0333
  • chr1:24,270,460 loading 0.0312
Ancestry reconstruction error: 0.90 (high - dog sits between cluster centroids)
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