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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ34D08_PFZ34D08, a Carolina Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ34D08_PFZ34D08

PFZ34D08_PFZ34D08 is a Carolina Dog from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ34D08_PFZ34D08 in the atlas
About PFZ34D08_PFZ34D08
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ34D08_PFZ34D08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ34D08_PFZ34D08's. Click any of them to keep exploring.

  1. PFZ43C02_PFZ43C02 Siberian Husky 20.69
  2. TU38_TU38 Village Dog Turkey Istanbul 22.82
  3. PFZ1A08_PFZ1A08 Village Dog Us Alaska 24.24
  4. PFZ1B01_PFZ1B01 Village Dog Us Alaska 26.73
  5. PFZ17A12_PFZ17A12 Siberian Husky 27.21
PFZ34D08_PFZ34D08's breed

PFZ34D08_PFZ34D08 sits in the German Shepherd cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 74%
  2. Golden Retriever 26%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Carolina Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 T/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.144
y 3.059
z 0.929
Top-3 principal components by |z|

The 3 PCs on which PFZ34D08_PFZ34D08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC146 z = 2.94
  • chr2:41,835,446 loading 0.0357
  • chr2:40,086,289 loading 0.0341
  • chr22:28,657,814 loading -0.0335
PC47 z = 2.17
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
PC183 z = -2.01
  • chr23:32,351,248 loading 0.0384
  • chr7:40,629,884 loading 0.0327
  • chr21:33,590,242 loading -0.0320
Ancestry reconstruction error: 0.43
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