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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ35A05_PFZ35A05, a Rat Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ35A05_PFZ35A05

PFZ35A05_PFZ35A05 is a Rat Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ35A05_PFZ35A05 in the atlas
About PFZ35A05_PFZ35A05

PFZ35A05_PFZ35A05 sits well inside the Rat Terrier cluster - a fairly typical example.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ35A05_PFZ35A05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ35A05_PFZ35A05's. Click any of them to keep exploring.

  1. PFZ35G04_PFZ35G04 Rat Terrier 19.95
  2. PFZ33B06_PFZ33B06 Jack Russell Terrier 20.59
  3. PFZ44G12_PFZ44G12 Rat Terrier 21.60
  4. PFZ35E03_PFZ35E03 Rat Terrier 21.80
  5. PFZ16C10_PFZ16C10 Jack Russell Terrier 22.10
PFZ35A05_PFZ35A05's breed

PFZ35A05_PFZ35A05 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 54%
  2. Labrador Retriever 46%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Rat Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.136
y 1.218
z 2.280
PCA-256 distance from breed centroid
16.74
Outlier percentile in breed
33
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ35A05_PFZ35A05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC187 z = 1.88
  • chr20:38,870,936 loading 0.0437
  • chr20:38,628,243 loading -0.0415
  • chr14:6,119,398 loading -0.0403
PC209 z = 1.66
  • chr7:5,846,709 loading 0.0374
  • chr7:2,256,768 loading -0.0351
  • chr25:8,169,704 loading 0.0337
PC244 z = 1.59
  • chr9:27,289,940 loading 0.0354
  • chr25:21,796,415 loading 0.0335
  • chr20:38,277,512 loading -0.0333
Ancestry reconstruction error: 0.57
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