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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ35F11_PFZ35F11, a Redbone Coonhound
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ35F11_PFZ35F11

PFZ35F11_PFZ35F11 is a Redbone Coonhound from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ35F11_PFZ35F11 in the atlas
About PFZ35F11_PFZ35F11
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ35F11_PFZ35F11's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ35F11_PFZ35F11's. Click any of them to keep exploring.

  1. PFZ38D10_PFZ38D10 Beagle 22.70
  2. PFZ42F02_PFZ42F02 Beagle 23.28
  3. PFZ42A03_PFZ42A03 Beagle 23.42
  4. PFZ44D12_PFZ44D12 Beagle 23.80
  5. PFZ44C11_PFZ44C11 Beagle 23.84
PFZ35F11_PFZ35F11's breed

PFZ35F11_PFZ35F11 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 54%
  2. Labrador Retriever 47%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Redbone Coonhound.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 1.180
y 5.190
z 3.808
Top-3 principal components by |z|

The 3 PCs on which PFZ35F11_PFZ35F11 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC47 z = 3.79
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
PC42 z = -3.67
  • chr14:22,119,741 loading 0.0316
  • chr5:79,283,975 loading -0.0300
  • chr5:64,357,114 loading -0.0296
PC48 z = -3.24
  • chr2:6,428,604 loading 0.0354
  • chr22:6,962,924 loading 0.0351
  • chr12:19,589,576 loading 0.0339
Ancestry reconstruction error: 0.49
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