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CanVAS Shannon · Founder
Cosmic medallion portrait of PFZ39G03_PFZ39G03, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ39G03_PFZ39G03

PFZ39G03_PFZ39G03 is a Labrador Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See PFZ39G03_PFZ39G03 in the atlas
About PFZ39G03_PFZ39G03

PFZ39G03_PFZ39G03 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ39G03_PFZ39G03's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ39G03_PFZ39G03's. Click any of them to keep exploring.

  1. 3082_3082 Labrador Retriever 21.86
  2. PFZ7D01_PFZ7D01 Labrador Retriever 22.54
  3. PFZ18E02_PFZ18E02 Labrador Retriever 22.90
  4. 3633_3633 Labrador Retriever 22.91
  5. PFZ39B05_PFZ39B05 Labrador Retriever 23.00
PFZ39G03_PFZ39G03's breed

PFZ39G03_PFZ39G03 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 9.021
y -0.166
z 7.416
PCA-256 distance from breed centroid
53.22
Outlier percentile in breed
23
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ39G03_PFZ39G03 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC79 z = 2.76
  • chr3:7,389,779 loading 0.0444
  • chr3:6,720,531 loading -0.0378
  • chr3:6,392,552 loading -0.0378
PC139 z = -2.40
  • chr11:59,916,847 loading 0.0380
  • chr1:13,688,590 loading -0.0336
  • chr9:44,269,754 loading 0.0311
PC3 z = -2.37
  • chr6:50,750,182 loading 0.0295
  • chr6:65,585,567 loading 0.0275
  • chr1:14,618,344 loading 0.0264
Ancestry reconstruction error: 0.86
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