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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ3C05_PFZ3C05, a Village Dog Mexico Mexico City
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ3C05_PFZ3C05

PFZ3C05_PFZ3C05 is labelled Village Dog Mexico Mexico City in the Hayward2016 cohort - a catch-all CanVAS label, not a literal ancestry call. One of 14,478 dogs who built the atlas.

See PFZ3C05_PFZ3C05 in the atlas
About PFZ3C05_PFZ3C05
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ3C05_PFZ3C05's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ3C05_PFZ3C05's. Click any of them to keep exploring.

  1. 8232_8232 Village Dog Belize 21.98
  2. PFZ3G12_PFZ3G12 Village Dog Puerto Rico 22.13
  3. PFZ12B05_PFZ12B05 Village Dog Lebanon Beruit 22.13
  4. FP08_FP08 Village Dog French Polynesia Society Islands Bora Bora 22.97
  5. LE33_LE33 Village Dog Lebanon Beruit 23.07
PFZ3C05_PFZ3C05's breed

PFZ3C05_PFZ3C05's genome decomposes mostly into Golden Retriever, with additional weight on Labrador Retriever.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 57%
  2. Labrador Retriever 43%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Village Dog Mexico Mexico City.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.537
y 1.620
z 1.772
Top-3 principal components by |z|

The 3 PCs on which PFZ3C05_PFZ3C05 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC156 z = 1.70
  • chr24:4,330,562 loading 0.0395
  • chr1:76,396,561 loading -0.0378
  • chr24:4,851,124 loading -0.0357
PC210 z = 1.66
  • chr14:14,236,787 loading 0.0332
  • chr19:34,609,563 loading -0.0320
  • chr24:23,645,624 loading 0.0312
PC146 z = 1.63
  • chr2:41,835,446 loading 0.0357
  • chr2:40,086,289 loading 0.0341
  • chr22:28,657,814 loading -0.0335
Ancestry reconstruction error: 0.57
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