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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ41E09_PFZ41E09, a Basset Hound
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ41E09_PFZ41E09

PFZ41E09_PFZ41E09 is a Basset Hound from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ41E09_PFZ41E09 in the atlas
About PFZ41E09_PFZ41E09

PFZ41E09_PFZ41E09 sits well inside the Basset Hound cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ41E09_PFZ41E09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ41E09_PFZ41E09's. Click any of them to keep exploring.

  1. PFZ8D06_PFZ8D06 Basset Hound 17.18
  2. PFZ41D09_PFZ41D09 Basset Hound 17.20
  3. PFZ8E01_PFZ8E01 Basset Hound 17.27
  4. PFZ33C04_PFZ33C04 Basset Hound 17.42
  5. PFZ9F07_PFZ9F07 Basset Hound 17.65
PFZ41E09_PFZ41E09's breed

PFZ41E09_PFZ41E09 sits in the Basset Hound cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Basset Hound 85%
  2. Labrador Retriever 8%
  3. Golden Retriever 7%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Basset Hound.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 T/T
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -3.107
y 15.632
z 0.351
PCA-256 distance from breed centroid
17.50
Outlier percentile in breed
29
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ41E09_PFZ41E09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC70 z = -13.30
  • chr13:1,243,516 loading 0.0318
  • chr13:1,443,325 loading -0.0301
  • chr18:21,034,428 loading 0.0292
PC72 z = 7.89
  • chr22:15,601,204 loading 0.0364
  • chr22:2,850,748 loading 0.0330
  • chr22:15,670,985 loading -0.0317
PC47 z = 5.18
  • chr22:2,367,358 loading 0.0405
  • chr22:5,622,508 loading -0.0403
  • chr22:4,235,154 loading -0.0403
Ancestry reconstruction error: 0.24
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