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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ41G09_PFZ41G09, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ41G09_PFZ41G09

PFZ41G09_PFZ41G09 is a Labrador Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ41G09_PFZ41G09 in the atlas
About PFZ41G09_PFZ41G09

PFZ41G09_PFZ41G09 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ41G09_PFZ41G09's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ41G09_PFZ41G09's. Click any of them to keep exploring.

  1. 3037_3037 Labrador Retriever 24.66
  2. Li86_Li86 Catahoula Leopard Dog 25.39
  3. PFZ5B06_PFZ5B06 Labrador Retriever 26.63
  4. PFZ41B07_PFZ41B07 Labrador Retriever 27.70
  5. cHD11_542_cHD11_542 Labrador Or Golden Retriever 27.90
PFZ41G09_PFZ41G09's breed

PFZ41G09_PFZ41G09 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 70%
  2. Golden Retriever 30%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.869
y 0.686
z 5.803
PCA-256 distance from breed centroid
45.80
Outlier percentile in breed
1
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ41G09_PFZ41G09 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC232 z = 1.74
  • chr8:13,394,852 loading 0.0320
  • chr30:2,998,314 loading 0.0313
  • chr12:26,709,882 loading 0.0290
PC199 z = 1.68
  • chr3:72,396,064 loading 0.0333
  • chr10:25,699,634 loading 0.0321
  • chr13:22,942,852 loading 0.0315
PC139 z = -1.53
  • chr11:59,916,847 loading 0.0380
  • chr1:13,688,590 loading -0.0336
  • chr9:44,269,754 loading 0.0311
Ancestry reconstruction error: 0.77
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