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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ44A06_PFZ44A06, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ44A06_PFZ44A06

PFZ44A06_PFZ44A06 is a Labrador Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ44A06_PFZ44A06 in the atlas
About PFZ44A06_PFZ44A06

PFZ44A06_PFZ44A06 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ44A06_PFZ44A06's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ44A06_PFZ44A06's. Click any of them to keep exploring.

  1. Li86_Li86 Catahoula Leopard Dog 25.93
  2. PFZ3A07_PFZ3A07 Village Dog Puerto Rico 26.27
  3. 8234_8234 Village Dog Belize 26.44
  4. PFZ3D07_PFZ3D07 Village Dog Puerto Rico 26.56
  5. PFZ3G12_PFZ3G12 Village Dog Puerto Rico 26.68
PFZ44A06_PFZ44A06's breed

PFZ44A06_PFZ44A06 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 54%
  2. Golden Retriever 46%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL A/A
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.943
y 1.724
z 1.974
PCA-256 distance from breed centroid
48.66
Outlier percentile in breed
9
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ44A06_PFZ44A06 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC217 z = -2.06
  • chr3:37,847,773 loading 0.0404
  • chr3:37,885,813 loading 0.0400
  • chr3:38,305,313 loading 0.0391
PC240 z = -1.73
  • chr16:43,515,565 loading 0.0364
  • chr12:4,421,359 loading 0.0345
  • chr12:4,288,226 loading 0.0342
PC173 z = -1.63
  • chr17:4,173,842 loading 0.0406
  • chr17:4,233,511 loading 0.0400
  • chr17:4,353,120 loading 0.0343
Ancestry reconstruction error: 0.84
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