Skip to main content
snıff
CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ44E12_PFZ44E12, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ44E12_PFZ44E12

PFZ44E12_PFZ44E12 is a Labrador Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ44E12_PFZ44E12 in the atlas
About PFZ44E12_PFZ44E12

PFZ44E12_PFZ44E12 sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ44E12_PFZ44E12's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ44E12_PFZ44E12's. Click any of them to keep exploring.

  1. 437_437 Labrador Retriever 20.57
  2. 3684_3684 Labrador Retriever 22.35
  3. PFZ2B12_PFZ2B12 Labrador Retriever 22.48
  4. 4103_4103 Labrador Retriever 22.55
  5. PFZ34E06_PFZ34E06 Labrador Retriever 22.86
PFZ44E12_PFZ44E12's breed

PFZ44E12_PFZ44E12 sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 76%
  2. Golden Retriever 24%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.365
y 0.618
z 5.610
PCA-256 distance from breed centroid
48.60
Outlier percentile in breed
9
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ44E12_PFZ44E12 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC245 z = 2.60
  • chr5:79,585,745 loading 0.0313
  • chr14:5,105,246 loading 0.0300
  • chr24:4,166,647 loading -0.0289
PC36 z = -2.10
  • chr18:29,956,251 loading 0.0345
  • chr26:19,556,698 loading 0.0316
  • chr21:15,780,220 loading -0.0288
PC252 z = 1.93
  • chr19:30,132,204 loading 0.0320
  • chr25:21,796,415 loading -0.0316
  • chr3:5,565,848 loading 0.0303
Ancestry reconstruction error: 0.89
Back to the Atlas →