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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ6F08_PFZ6F08, a Saluki
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ6F08_PFZ6F08

PFZ6F08_PFZ6F08 is a Saluki from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ6F08_PFZ6F08 in the atlas
About PFZ6F08_PFZ6F08

PFZ6F08_PFZ6F08 sits near the center of the Saluki cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ6F08_PFZ6F08's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ6F08_PFZ6F08's. Click any of them to keep exploring.

  1. PFZ42A07_PFZ42A07 Saluki 15.20
  2. PFZ6D04_PFZ6D04 Saluki 16.73
  3. PFZ7E12_PFZ7E12 Saluki 17.20
  4. PFZ7F12_PFZ7F12 Saluki 17.98
  5. PFZ6G08_PFZ6G08 Saluki 18.65
PFZ6F08_PFZ6F08's breed

PFZ6F08_PFZ6F08 sits in the Saluki cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Saluki 87%
  2. Golden Retriever 7%
  3. Labrador Retriever 6%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Saluki.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 T/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.100
y 3.696
z 1.130
PCA-256 distance from breed centroid
21.31
Outlier percentile in breed
19
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ6F08_PFZ6F08 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC59 z = -3.88
  • chr13:17,017,437 loading 0.0335
  • chr22:61,087,087 loading -0.0324
  • chr13:7,369,721 loading -0.0313
PC251 z = -3.39
  • chr25:40,121,397 loading 0.0326
  • chr28:17,013,099 loading 0.0310
  • chr26:15,170,564 loading 0.0302
PC186 z = -3.13
  • chr3:6,234,729 loading 0.0318
  • chr23:19,305,339 loading 0.0317
  • chr19:17,376,904 loading 0.0316
Ancestry reconstruction error: 0.33
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