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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ7D10_PFZ7D10, a Newfoundland
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ7D10_PFZ7D10

PFZ7D10_PFZ7D10 is a Newfoundland from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ7D10_PFZ7D10 in the atlas
About PFZ7D10_PFZ7D10

PFZ7D10_PFZ7D10 sits at the edge of the Newfoundland cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
PFZ7D10_PFZ7D10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ7D10_PFZ7D10's. Click any of them to keep exploring.

  1. NFd_LU1386_NFd_LU1386 Newfoundland 17.09
  2. cHD8_549_cHD8_549 Newfoundland 17.15
  3. cHD8_508_cHD8_508 Newfoundland 17.41
  4. PFZ9D08_PFZ9D08 Newfoundland 17.43
  5. cHD8_502_cHD8_502 Newfoundland 17.49
PFZ7D10_PFZ7D10's breed

PFZ7D10_PFZ7D10 sits firmly in the Newfoundland cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Newfoundland 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Newfoundland.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -0.214
y -5.686
z 3.696
PCA-256 distance from breed centroid
32.08
Outlier percentile in breed
73
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ7D10_PFZ7D10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC15 z = -7.55
  • chr27:9,604,099 loading 0.0251
  • chr9:58,501,670 loading -0.0250
  • chr9:46,847,361 loading 0.0246
PC16 z = 4.73
  • chr12:35,746,865 loading 0.0308
  • chr23:4,266,972 loading -0.0287
  • chr12:34,964,869 loading 0.0275
PC155 z = -3.29
  • chr3:3,559,803 loading 0.0324
  • chr6:3,540,503 loading -0.0319
  • chr15:3,475,065 loading 0.0316
Ancestry reconstruction error: 0.41
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