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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ8E10_PFZ8E10, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ8E10_PFZ8E10

PFZ8E10_PFZ8E10 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ8E10_PFZ8E10 in the atlas
About PFZ8E10_PFZ8E10

PFZ8E10_PFZ8E10 sits well inside the Golden Retriever cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ8E10_PFZ8E10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ8E10_PFZ8E10's. Click any of them to keep exploring.

  1. PFZ8H07_PFZ8H07 Golden Retriever 31.58
  2. GRLS_grlsB3KBYTHH Golden Retriever 32.28
  3. GRLS_grlsAYTJ8CEE Golden Retriever 32.63
  4. GRLS_grls81HF1RZZ Golden Retriever 33.28
  5. GRLS_grlsSJP1SWLL Golden Retriever 33.44
PFZ8E10_PFZ8E10's breed

PFZ8E10_PFZ8E10 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 84%
  2. Labrador Retriever 16%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.894
y 11.006
z 8.527
PCA-256 distance from breed centroid
31.24
Outlier percentile in breed
34
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ8E10_PFZ8E10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC235 z = 2.56
  • chr5:7,618,997 loading 0.0371
  • chr18:10,714,022 loading 0.0318
  • chr25:27,400,046 loading 0.0312
PC43 z = -2.52
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC111 z = -2.49
  • chr25:27,400,046 loading 0.0340
  • chr8:38,891,669 loading -0.0320
  • chr6:31,045,365 loading -0.0319
Ancestry reconstruction error: 0.54
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