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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ9C04_PFZ9C04, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ9C04_PFZ9C04

PFZ9C04_PFZ9C04 is a Golden Retriever from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ9C04_PFZ9C04 in the atlas
About PFZ9C04_PFZ9C04

PFZ9C04_PFZ9C04 sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
PFZ9C04_PFZ9C04's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ9C04_PFZ9C04's. Click any of them to keep exploring.

  1. PFZ9F03_PFZ9F03 Golden Retriever 25.82
  2. PFZ40G06_PFZ40G06 Mix 28.23
  3. IN40_IN40 Golden Retriever 28.79
  4. PFZ35A04_PFZ35A04 Golden Retriever 29.67
  5. PFZ24F03_PFZ24F03 Golden Retriever 30.03
PFZ9C04_PFZ9C04's breed

PFZ9C04_PFZ9C04 sits firmly in the Golden Retriever cluster.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 100%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 A/G
LCORL A/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.089
y 1.946
z 2.088
PCA-256 distance from breed centroid
36.53
Outlier percentile in breed
61
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ9C04_PFZ9C04 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC135 z = -1.73
  • chr8:33,499,010 loading 0.0341
  • chr6:30,409,356 loading -0.0338
  • chr34:15,382,542 loading -0.0330
PC162 z = -1.52
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
PC132 z = 1.50
  • chr3:4,746,866 loading 0.0453
  • chr3:4,905,795 loading 0.0406
  • chr13:12,284,714 loading 0.0392
Ancestry reconstruction error: 0.66
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