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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ9C12_PFZ9C12, a Tibetan Terrier
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ9C12_PFZ9C12

PFZ9C12_PFZ9C12 is a Tibetan Terrier from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ9C12_PFZ9C12 in the atlas
About PFZ9C12_PFZ9C12

PFZ9C12_PFZ9C12 sits at the edge of the Tibetan Terrier cluster but still well within it.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ9C12_PFZ9C12's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ9C12_PFZ9C12's. Click any of them to keep exploring.

  1. PFZ26H12_PFZ26H12 Tibetan Terrier 17.20
  2. PFZ35G02_PFZ35G02 Tibetan Terrier 17.25
  3. TT_23713_TT_23713 Tibetan Terrier 19.42
  4. PFZ26F12_PFZ26F12 Tibetan Terrier 19.42
  5. Ter_GT385_Ter_GT385 Mix 19.43
PFZ9C12_PFZ9C12's breed

PFZ9C12_PFZ9C12 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 56%
  2. Labrador Retriever 44%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Tibetan Terrier.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.610
y 2.129
z 3.140
PCA-256 distance from breed centroid
12.94
Outlier percentile in breed
67
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ9C12_PFZ9C12 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC233 z = 4.20
  • chr16:48,608,303 loading 0.0348
  • chr13:24,655,299 loading -0.0330
  • chr23:1,734,032 loading 0.0330
PC186 z = -3.32
  • chr3:6,234,729 loading 0.0318
  • chr23:19,305,339 loading 0.0317
  • chr19:17,376,904 loading 0.0316
PC169 z = 3.20
  • chr11:19,692,422 loading 0.0364
  • chr11:16,885,817 loading -0.0352
  • chr9:14,385,903 loading 0.0333
Ancestry reconstruction error: 0.73
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