Skip to main content
snıff
CanVAS Parker · Founder
Cosmic medallion portrait of SALU_ArabPen_SALU_23362, a Saluki
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

SALU_ArabPen_SALU_23362

SALU_ArabPen_SALU_23362 is a Saluki from the Parker research cohort. One of 14,478 dogs who built the atlas.

See SALU_ArabPen_SALU_23362 in the atlas
About SALU_ArabPen_SALU_23362

SALU_ArabPen_SALU_23362 sits well inside the Saluki cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
SALU_ArabPen_SALU_23362's nearest neighbors

The five dogs in the atlas whose genomes sit closest to SALU_ArabPen_SALU_23362's. Click any of them to keep exploring.

  1. QA32_QA32 Village Dog Qatar 18.24
  2. SALU_Tribal_SALU_23361 Saluki 18.37
  3. QA6_QA6 Village Dog Qatar 18.84
  4. SALU_ArabPen_SALU_24402 Saluki 19.10
  5. QA25_QA25 Village Dog Qatar 19.56
SALU_ArabPen_SALU_23362's breed

SALU_ArabPen_SALU_23362 sits in the Saluki cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Saluki 85%
  2. Golden Retriever 9%
  3. Labrador Retriever 6%
Source

From the CanVAS (Parker cohort) . Breed-page reference: Saluki.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.037
y 3.512
z 0.972
PCA-256 distance from breed centroid
22.01
Outlier percentile in breed
27
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which SALU_ArabPen_SALU_23362 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC59 z = -2.84
  • chr13:17,017,437 loading 0.0335
  • chr22:61,087,087 loading -0.0324
  • chr13:7,369,721 loading -0.0313
PC26 z = -2.45
  • chr6:1,658,873 loading 0.0279
  • chr6:1,741,489 loading 0.0277
  • chr27:35,211,437 loading -0.0271
PC67 z = 2.27
  • chr20:37,137,374 loading 0.0345
  • chr37:21,909,127 loading -0.0321
  • chr23:49,705,023 loading 0.0289
Ancestry reconstruction error: 0.41
Back to the Atlas →