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CanVAS Parker · Founder
Cosmic medallion portrait of SALU_ArabPen_SALU_24265, a Saluki
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

SALU_ArabPen_SALU_24265

SALU_ArabPen_SALU_24265 is a Saluki from the Parker research cohort. One of 14,478 dogs who built the atlas.

See SALU_ArabPen_SALU_24265 in the atlas
About SALU_ArabPen_SALU_24265

SALU_ArabPen_SALU_24265 sits well inside the Saluki cluster - a fairly typical example.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
SALU_ArabPen_SALU_24265's nearest neighbors

The five dogs in the atlas whose genomes sit closest to SALU_ArabPen_SALU_24265's. Click any of them to keep exploring.

  1. SLOU_NAfrica_SLOU_24408 Sloughi 19.05
  2. QA35_QA35 Village Dog Qatar 20.63
  3. QA4_QA4 Village Dog Qatar 22.02
  4. PFZ2H09_PFZ2H09 Village Dog Iraq 22.28
  5. PFZ1D04_PFZ1D04 Caucasian Ovcharka 22.72
SALU_ArabPen_SALU_24265's breed

SALU_ArabPen_SALU_24265 sits in the Saluki cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Saluki 85%
  2. Golden Retriever 8%
  3. Labrador Retriever 7%
Source

From the CanVAS (Parker cohort) . Breed-page reference: Saluki.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/T
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 T/C
KRT71 T/C
MC1R T/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/C
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.917
y 3.288
z 1.002
PCA-256 distance from breed centroid
22.88
Outlier percentile in breed
46
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which SALU_ArabPen_SALU_24265 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC211 z = 2.32
  • chr18:2,884,545 loading 0.0378
  • chr18:2,790,632 loading -0.0346
  • chr19:17,007,564 loading -0.0346
PC227 z = -2.08
  • chr27:43,803,988 loading 0.0373
  • chr12:19,514,576 loading 0.0344
  • chr20:11,758,428 loading -0.0328
PC215 z = -1.84
  • chr19:7,211,690 loading 0.0376
  • chr19:7,271,993 loading 0.0341
  • chr27:40,183,759 loading 0.0317
Ancestry reconstruction error: 0.45
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