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CanVAS Parker · Founder
Cosmic medallion portrait of VPIN_Italy_VPIN_24518, a German Pinscher
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

VPIN_Italy_VPIN_24518

VPIN_Italy_VPIN_24518 is a German Pinscher from the Parker research cohort. One of 14,478 dogs who built the atlas.

See VPIN_Italy_VPIN_24518 in the atlas
About VPIN_Italy_VPIN_24518
  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Carrier of the RSPO2 wire-coat variant (single copy).
VPIN_Italy_VPIN_24518's nearest neighbors

The five dogs in the atlas whose genomes sit closest to VPIN_Italy_VPIN_24518's. Click any of them to keep exploring.

  1. VPIN_Italy_VPIN_24529 German Pinscher 13.29
  2. VPIN_Italy_VPIN_24547 German Pinscher 17.40
  3. PFZ34D07_PFZ34D07 Pomeranian 21.95
  4. PFZ34C07_PFZ34C07 Pomeranian 22.44
  5. PFZ17E02_PFZ17E02 Pomeranian 22.48
VPIN_Italy_VPIN_24518's breed

VPIN_Italy_VPIN_24518 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 55%
  2. Labrador Retriever 45%
Source

From the CanVAS (Parker cohort) . Breed-page reference: German Pinscher.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.663
y 1.276
z 1.999
Top-3 principal components by |z|

The 3 PCs on which VPIN_Italy_VPIN_24518 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC249 z = 2.42
  • chr6:30,830,915 loading 0.0329
  • chr1:22,842,587 loading 0.0316
  • chr7:61,438,680 loading -0.0291
PC240 z = 1.93
  • chr16:43,515,565 loading 0.0364
  • chr12:4,421,359 loading 0.0345
  • chr12:4,288,226 loading 0.0342
PC184 z = 1.83
  • chr21:19,144,029 loading 0.0303
  • chr13:28,713,034 loading -0.0303
  • chr15:5,912,708 loading 0.0300
Ancestry reconstruction error: 0.57
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