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CanVAS Chen · Founder
Cosmic medallion portrait of W_GoS_GoS_LU627, a Gordon Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

W_GoS_GoS_LU627

W_GoS_GoS_LU627 is a Gordon Setter from the Chen research cohort. One of 14,478 dogs who built the atlas.

See W_GoS_GoS_LU627 in the atlas
About W_GoS_GoS_LU627

W_GoS_GoS_LU627 sits well inside the Gordon Setter cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Smooth coat. No wire-furnishings variant at RSPO2.
W_GoS_GoS_LU627's nearest neighbors

The five dogs in the atlas whose genomes sit closest to W_GoS_GoS_LU627's. Click any of them to keep exploring.

  1. GoS_LU627_GoS_LU627 Gordon Setter 4.80
  2. GoS_LU628_GoS_LU628 Gordon Setter 19.06
  3. GoS_LU610_GoS_LU610 Gordon Setter 19.41
  4. GoS_LU645_GoS_LU645 Gordon Setter 19.62
  5. GoS_LU644_GoS_LU644 Gordon Setter 19.69
W_GoS_GoS_LU627's breed

W_GoS_GoS_LU627 sits in the Gordon Setter cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Gordon Setter 87%
  2. Labrador Retriever 7%
  3. Golden Retriever 6%
Source

From the CanVAS (Chen cohort) . Breed-page reference: Gordon Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/T
SMAD2 G/G
LCORL A/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.713
y 4.184
z -7.002
PCA-256 distance from breed centroid
31.46
Outlier percentile in breed
41
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which W_GoS_GoS_LU627 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC55 z = 7.84
  • chr24:21,414,064 loading 0.0303
  • chr22:46,871,951 loading -0.0285
  • chr34:8,498,060 loading -0.0284
PC54 z = -6.57
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
PC188 z = 5.10
  • chr7:21,167,050 loading 0.0346
  • chr25:32,919,094 loading 0.0335
  • chr7:21,698,587 loading 0.0335
Ancestry reconstruction error: 0.50
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