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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of WSS_25078_WSS_25078, a Welsh Springer Spaniel
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

WSS_25078_WSS_25078

WSS_25078_WSS_25078 is a Welsh Springer Spaniel from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See WSS_25078_WSS_25078 in the atlas
About WSS_25078_WSS_25078
  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Smooth coat. No wire-furnishings variant at RSPO2.
WSS_25078_WSS_25078's nearest neighbors

The five dogs in the atlas whose genomes sit closest to WSS_25078_WSS_25078's. Click any of them to keep exploring.

  1. WSS_34008_WSS_34008 Welsh Springer Spaniel 15.58
  2. WSS_24604_WSS_24604 Welsh Springer Spaniel 16.59
  3. WSS_33784_WSS_33784 Welsh Springer Spaniel 16.59
  4. WSS_25165_WSS_25165 Welsh Springer Spaniel 17.42
  5. WSS_7617_WSS_7617 Welsh Springer Spaniel 17.83
WSS_25078_WSS_25078's breed

WSS_25078_WSS_25078 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 53%
  2. Labrador Retriever 47%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Welsh Springer Spaniel.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 0.261
y 10.891
z 5.041
Top-3 principal components by |z|

The 3 PCs on which WSS_25078_WSS_25078 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC226 z = -11.19
  • chr21:30,613,458 loading 0.0378
  • chr28:5,497,677 loading 0.0367
  • chr28:5,428,661 loading 0.0358
PC219 z = 8.18
  • chr11:18,600,601 loading 0.0312
  • chr14:14,201,384 loading 0.0302
  • chr3:6,077,116 loading -0.0298
PC221 z = -8.07
  • chr23:23,759,985 loading 0.0312
  • chr2:32,595,915 loading 0.0312
  • chr3:6,457,748 loading -0.0306
Ancestry reconstruction error: 0.94 (high - dog sits between cluster centroids)
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