Belgian Malinois
12 Belgian Malinoiss in the atlas. Every number on this page has a source.
12 Belgian Malinoiss in the Sniff Atlas. Population-genetic snapshot, Mendelian carrier frequencies from Donner 2023, and the data substrate's release version, sample sizes, and evidence tier on every claim.
Also known as (Chien de Berger Belge), Malinois, Mechelaar, and Mechelse Herder.
Belgian Malinois have a moderately varied genetic background, meaning they have a good mix of traits without being too closely related. They share some similarities with breeds like the Bouvier des Flandres and Rhodesian Ridgeback. Since only a small number of dogs were studied, this picture might change as more information becomes available. No specific health concerns were found in their tested genes, but it’s always a good idea to check with your vet or consider genetic testing for your own dog.
In the atlas, the Belgian Malinois clusters consistently as Belgian Malinois (100% of the 12 dogs here). Genetic diversity is high (mean heterozygosity 0.3289), reflecting either a mixed-breed cluster or breeds with broad genetic backgrounds. At the trait loci, HMGA2 runs lower than average (8% here vs 56%); MSRB3 runs lower than average (50% here vs 80%).
Mean heterozygosity is 0.329, notably high, indicates broad genetic background. Low breed predictability score (0.20), individual dogs of this breed vary widely in genetics, suggesting active substructure or sub-population diversity. Only 12 dogs of this breed in the atlas, modestly sampled.
What the genome says about Belgian Malinois
Computed from the 18,477 research dogs in the Atlas.
Not enough dogs in the atlas yet (n=12) for a reliable diversity figure. It fills in as more are added.
What does genetic diversity mean?
How varied a breed's gene pool is — the share of gene spots where a typical dog of the breed carries two different versions rather than two identical ones.
How to read it: Higher = more diverse. Among well-sampled breeds it ranges roughly 0.22 (least diverse) to 0.33 (most diverse).
Diversity is a strength, not a verdict on any individual dog. Lower diversity means it's worth paying attention to recessive-risk testing — not that a dog is doomed.
Not enough dogs in the atlas yet (n=12) to resolve cluster structure. It fills in as more are added.
What does within-breed variation mean?
How much individual dogs within the breed differ from each other genetically.
How to read it: Higher = more internal variety among individuals of the breed.
Sensitive to how many dogs of the breed we've sampled.
Frequency of the alternate allele in this breed at each locus's representative SNP.
Not enough Belgian Malinoiss in the atlas yet (n=12) for reliable allele frequencies at these loci. It fills in as more are added.
Other names
The Belgian Malinois is also recorded as (Chien de Berger Belge), Malinois, Mechelaar, Mechelse Herder, Mechelse Scheper, and Pastor Belga Malinois.
Identified as Belgian Malinois (VBO:0200147) in the Vertebrate Breed Ontology (Mullen et al. 2025, CC-BY 4.0) · registry IDs FCI 15 · iDog 29 · VeNom 14764.
What does the genome say about how a Belgian Malinois looks?
Belgian Malinoiss look the way they do because of a small set of fixed and near-fixed morphology genes that, taken together, define the visible breed. Each translation below pairs the gene with the trait an owner actually sees, the breed's allele frequency at that locus, and a one-clause causal phrase.
Where the breed-defining genes act, mapped on a generic dog-body key — and how fixed each marker is in the Belgian Malinois. The figure is the most-settled marker we read in that region; the full per-locus panel is below. (The silhouette is a shared anatomical guide, not this breed's outline.)
Size and build
IGF1 sits at 50% for the small-body allele. IGF1 is the gene that sets dog body size from Chihuahua to Great Dane. Intermediate frequencies typically keep a breed in the mid-sized range rather than tipping toward the larger working forms.
IGF1what this gene does
IGF1 is a gene that plays a key role in determining a dog's body size. It influences how much a dog grows, affecting overall stature.
For your dog: Knowing about IGF1 gives you insight into your dog's size traits, but it’s just one part of the bigger picture when it comes to their health and care.
Full IGF1 gene page →HMGA2 is at 8%, leaving most of the size signal to other loci in the panel.
HMGA2what this gene does
HMGA2 is a gene that influences body size in dogs, helping determine how big or small a dog grows.
For your dog: Knowing about HMGA2 helps you appreciate the genetic factors behind your dog's size, but it doesn't signal any health issues.
Full HMGA2 gene page →SMAD2 is near-fixed at 92%, a chromosome-7 height locus differentiating small from giant breeds.
SMAD2what this gene does
SMAD2 is a gene involved in regulating body size by influencing how cells grow and develop.
For your dog: Knowing about SMAD2 helps understand your dog's size traits but isn't linked to health issues; no immediate action needed.
Full SMAD2 gene page →LCORL sits at 67% at the NCAPG/LCORL height locus on chromosome 3.
LCORLwhat this gene does
LCORL is a gene that influences body size in dogs. It helps determine how big or small a dog might grow.
For your dog: Knowing about LCORL helps you appreciate the genetic factors behind your dog's size, but it’s just one piece of the bigger picture when it comes to health and care.
Full LCORL gene page →STC2 sits at 50%.
ADAMTS17 sits at 50%. ADAMTS17 is a body-size locus also linked to lens disorders.
ADAMTS17what this gene does
ADAMTS17 is a gene that influences body size and also plays a role in certain eye conditions. It affects the structure of tissues in the eye and elsewhere in the body.
For your dog: If your dog belongs to a breed known to carry ADAMTS17 variants, it’s worth discussing genetic testing and eye exams with your vet to stay ahead of potential issues.
Full ADAMTS17 gene page →Leg length
The FGF4 retrogene on chromosome 18 sits at 75%. This is the leg-length variant. The intermediate frequency means some dogs in this breed carry the short-legged allele and some do not.
The FGF4 retrogene on chromosome 12 is near-fixed at 92%, the chondrodystrophic variant associated with intervertebral disc disease risk in breeds that carry it.
Coat type, length, and color
RSPO2 sits at 50% for the furnishings variant. Furnishings (the eyebrow-and-mustache pattern seen in Schnauzers and Wheaten Terriers) vary across the population at this intermediate frequency, and visible expression depends on the specific allele combination each dog carries.
RSPO2what this gene does
RSPO2 influences the texture and appearance of a dog's coat, particularly the presence of 'furnishings' like mustaches and eyebrows. It helps determine whether a dog has that distinctive wiry or textured look.
For your dog: If your dog has those wiry eyebrows or a mustache, RSPO2 is part of the reason—no health worries, just a coat feature worth knowing about.
Full RSPO2 gene page →FGF5 sits at 50% for the long-coat variant. Coat length is influenced by other loci as well, so intermediate FGF5 frequencies do not always correspond to intermediate visible coat lengths.
FGF5what this gene does
FGF5 is a gene that influences the length of a dog's coat. It acts like a natural switch, telling hair follicles when to stop growing longer fur.
For your dog: If your dog has a notably long or short coat, FGF5 is likely part of the reason—no action needed, but it’s a neat genetic detail to know.
Full FGF5 gene page →KRT71 is near-fixed at 92% for the wavy/curly variant. Coat curl phenotype varies across breeds at this fixation depending on modifier loci, and visible expression is not always curled even when the locus is fixed.
KRT71what this gene does
KRT71 is a gene that influences the curliness of a dog's coat. It helps determine whether a dog's fur is straight or has a distinctive curl.
For your dog: If your dog has a curly coat, KRT71 is likely part of the reason; it’s a natural variation, not a health concern.
Full KRT71 gene page →MC1R sits at 33% at the representative SNP. MC1R controls the switch between red-to-gold pigment and black-to-brown pigment, with the e/e homozygous genotype producing the gold-to-red spectrum. Substrate frequencies at this SNP depend on the array's polarity, so visible coat color in the breed is a more reliable indicator than this single number.
MC1Rwhat this gene does
MC1R is a gene that influences coat color in dogs, affecting how pigments are produced in the fur.
For your dog: Knowing about MC1R gives insight into your dog's coat color but doesn't relate to health issues.
Full MC1R gene page →Ears
MSRB3 sits at 50% for the drop-ear allele, which is why ear set varies across the breed.
MSRB3what this gene does
MSRB3 is a gene involved in the development of ear shape and structure in dogs.
For your dog: Understanding MSRB3 helps explain why your dog's ears look the way they do, but it isn't linked to any health issues.
Full MSRB3 gene page →Skull shape
BMP3 sits at 50%, contributing to the breed's moderate, mesaticephalic head shape rather than the extreme brachycephalic form.
BMP3what this gene does
BMP3 is a gene that influences the shape of a dog's skull, particularly contributing to a shorter, broader head shape known as brachycephaly.
For your dog: If your dog has a broad, short skull, it's worth discussing with your vet how this might impact their health, even though BMP3 isn't directly tied to illness.
Full BMP3 gene page →SMOC2 sits at 67%, contributing to the breed's moderate head shape.
SMOC2what this gene does
SMOC2 influences the shape of a dog's skull, particularly affecting how flat or short the face appears.
For your dog: If your dog has a short nose, it's worth discussing with your vet how this trait might impact their health over time.
Full SMOC2 gene page →What genetic diseases do Belgian Malinoiss carry?
From a panel of 250 Mendelian-disease variants screened in 1,054,293 dogs (Donner et al. 2023), Belgian Malinoiss carry 12 of them at observable frequency. Carrier frequency is not clinical risk. Most recessive variants require two copies for disease expression; many dominant variants show incomplete penetrance. Read this as a population fingerprint of what's in the gene pool, not a per-dog prediction.
SOD1what this gene does
SOD1 is a gene that helps protect cells from damage caused by harmful molecules called free radicals.
For your dog: If your dog is a carrier of SOD1 variants, it's worth discussing with your vet, but remember carrier status doesn't mean your dog will get the disease.
IGFBP5what this gene does
IGFBP5 is a gene that helps regulate growth factors involved in tissue development and repair.
For your dog: If you have a sighthound, it’s worth mentioning IGFBP5-related risks to your vet, but being a carrier doesn’t mean your dog will develop the syndrome.
PDK4what this gene does
PDK4 helps regulate how cells use energy, especially in the heart muscle.
For your dog: If your dog is one of the breeds known to carry this gene, it’s worth discussing heart health with your vet, but being a carrier doesn’t mean your dog will develop disease.
SLC2A9what this gene does
SLC2A9 is a gene that helps regulate uric acid levels in a dog's body. It plays a role in how the kidneys handle this substance.
For your dog: If your dog is one of the breeds known to carry this gene variant, it’s worth discussing with your vet to understand any potential urinary health concerns.
ANO6what this gene does
ANO6 is a gene that helps regulate how blood cells expose certain signals on their surface, which is important for normal blood clotting.
For your dog: If your dog is from a breed known to carry ANO6 mutations, it’s worth discussing with your vet before any procedures to ensure bleeding risks are managed.
SLC7A9what this gene does
SLC7A9 is a gene that helps transport certain amino acids in the kidneys. It plays a role in how the body handles cystine, an amino acid that can form crystals.
For your dog: If your dog is a carrier, it’s worth discussing with your vet to monitor urinary health and catch any issues early.
FGF4what this gene does
FGF4 influences leg length by affecting bone growth, leading to shorter legs in certain breeds.
For your dog: If your dog is from a breed known to carry this gene, it's worth discussing spinal health with your vet, but being a carrier doesn’t guarantee problems.
NDRG1what this gene does
NDRG1 is a gene involved in nerve cell function and maintenance, helping keep the nervous system working properly.
For your dog: If your dog is from a breed known to carry NDRG1 variants, it’s worth discussing with your vet, especially if you notice any mobility issues.
Belgian Malinoiss are a natural model for human disease
Because the same genes cause the same conditions across species, the inherited conditions documented in Belgian Malinoiss help researchers understand, and work toward treating, the human diseases they model. This is the dog advancing human medicine. The breed models the human disease; it does not have it, and this is not a prediction for your dog.
- EAST syndrome, modeled by the breed's Ataxia, cerebellar, KCNJ10-related, the same underlying biology.
- OMIM:218000, modeled by the breed's Ataxia, spinocerebellar, SLC12A6-related, the same underlying biology.
- Griscelli syndrome type 3, modeled by the breed's Coat colour, dilution, MLPH-related, the same underlying biology.
- OMIM:105400, modeled by the breed's Degenerative myelopathy, the same underlying biology.
- hemophilia A, modeled by the breed's Haemophilia A, the same underlying biology.
- persistent Mullerian duct syndrome, modeled by the breed's Persistent Mullerian duct syndrome, generic, the same underlying biology.
Every condition recorded in the Belgian Malinois
Beyond the testable carriers above, OMIA's literature catalogue records 8 genetic conditions in the Belgian Malinois, 7 of which have a known human equivalent. This is the documented landscape across all Belgian Malinoiss ever studied, not a prediction for any one dog.
- Ataxia, cerebellar, KCNJ10-related Autosomal recessiveHuman equivalent: EAST syndrome
- Ataxia, spinocerebellar, SLC12A6-related Autosomal recessiveHuman equivalent: OMIM:218000
- Coat colour, dilution, MLPH-related Autosomal recessiveHuman equivalent: Griscelli syndrome type 3
- Degenerative myelopathy Autosomal recessiveHuman equivalent: OMIM:105400
- Haemophilia A X-linked recessiveHuman equivalent: hemophilia A
- Human equivalent: persistent Mullerian duct syndrome
- Polydactyly Autosomal dominantHuman equivalent: OMIM:174500
- Behaviour Multifactorial
Where every number on this page came from.
This page draws on three primary data sources. Carrier frequencies for the Mendelian section come from Donner et al. 2023 (CC-BY-4.0). We grade these data at evidence Limited because the cohort is a direct-to-consumer ascertainment, which biases toward owners who chose to test their dogs. The panel also uses tag-SNP proxies for some variants rather than direct causal-variant assays. Limited is a study-design grade, not a quality grade: the Donner cohort is the largest open canine-genotype dataset in existence and we are grateful for it. We rate the confounding MEDIUM.
Population-genetic dimensions (heterozygosity, intra-breed PCA distance, nearest neighbors, trait-locus frequencies) come from CanVAS (Brundage 2026), harmonized through the Sniff Atlas. The exact release date and verification commit are pinned at the bottom of the page so a researcher can trace a number back to a specific snapshot. The disease-gene-variant graph comes from OMIA (Online Mendelian Inheritance in Animals; Nicholas, Tammen, and the Sydney Informatics Hub at the Sydney School of Veterinary Science, The University of Sydney; retrieved April 2026, DOI 10.25910/2AMR-PV70).
What this page does not yet have. Inheritance modes and per-disease penetrance evidence from Donner 2023 are now in the structured data for every variant the panel covers. Mondo, OMIM, Ensembl, and HGNC cross-references on gene pages remain pending, they arrive in December 2026 alongside the imputed 9.67M-variant CanVAS dataset via the OMIA SQL dump absorption. Until then, gene IDs carry NCBI Gene and OMIA phene URLs only; the wider human-homolog and disease-ontology cross-reference set fills in with that release.
How to cite this page. The computed dimensions on this page are derived from the open Sniff Atlas v1.0.1 (Gehring 2026, doi:10.5281/zenodo.20566358, CC-BY 4.0). Full citation formats including BibTeX, RIS, and CITATION.cff at sniff.world/cite.
We have 12 belgian malinoiss. We do not have yours.
Every belgian malinois added sharpens the breed's genetic neighborhood. Enrollment is free. The data stays open. The star is permanent.
- Donner J, Freyer J, Davison S, Anderson H, Blades M, Honkanen L, et al. (2023). Genetic prevalence and clinical relevance of canine Mendelian disease variants in over one million dogs. PLOS Genetics 19(2):e1010651. doi:10.1371/journal.pgen.1010651
- Brundage J, et al. (2026). CanVAS: a harmonized canine variant atlas. bioRxiv. doi:10.64898/2026.04.13.718238
- Nicholas, F.W., Tammen, I., & Sydney Informatics Hub. (2026). Online Mendelian Inheritance in Animals (OMIA) [dataset]. The University of Sydney. https://omia.org. doi:10.25910/2AMR-PV70 (retrieved April 2026).