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CanVAS Shannon · Founder
Cosmic medallion portrait of AAH1LR_AAH1LR, a Labrador Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

AAH1LR_AAH1LR

AAH1LR_AAH1LR is a Labrador Retriever from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See AAH1LR_AAH1LR in the atlas
About AAH1LR_AAH1LR

AAH1LR_AAH1LR sits near the center of the Labrador Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
AAH1LR_AAH1LR's nearest neighbors

The five dogs in the atlas whose genomes sit closest to AAH1LR_AAH1LR's. Click any of them to keep exploring.

  1. PFZ16D10_PFZ16D10 Labrador Retriever 21.82
  2. PFZ41G06_PFZ41G06 Labrador Retriever 21.93
  3. PFZ41A10_PFZ41A10 Labrador Retriever 22.18
  4. 6019_6019 Labrador Retriever 22.19
  5. PFZ17G12_PFZ17G12 Labrador Retriever 22.35
AAH1LR_AAH1LR's breed

AAH1LR_AAH1LR sits in the Labrador Retriever cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Labrador Retriever 77%
  2. Golden Retriever 23%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Labrador Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 8.501
y 0.687
z 5.550
PCA-256 distance from breed centroid
49.77
Outlier percentile in breed
14
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which AAH1LR_AAH1LR scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC56 z = 2.36
  • chr4:50,564,575 loading 0.0345
  • chr20:9,086,763 loading 0.0319
  • chr15:1,031,002 loading -0.0297
PC36 z = -2.30
  • chr18:29,956,251 loading 0.0345
  • chr26:19,556,698 loading 0.0316
  • chr21:15,780,220 loading -0.0288
PC32 z = 2.01
  • chr23:20,231,163 loading 0.0295
  • chr22:42,651,822 loading -0.0294
  • chr27:39,738,665 loading 0.0291
Ancestry reconstruction error: 0.88
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