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CanVAS HaywardDeaf · Founder
Cosmic medallion portrait of ACD3_ACD3, a Australian Cattle Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

ACD3_ACD3

ACD3_ACD3 is a Australian Cattle Dog from the HaywardDeaf research cohort. One of 14,478 dogs who built the atlas.

See ACD3_ACD3 in the atlas
About ACD3_ACD3

ACD3_ACD3 sits near the center of the Australian Cattle Dog cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
ACD3_ACD3's nearest neighbors

The five dogs in the atlas whose genomes sit closest to ACD3_ACD3's. Click any of them to keep exploring.

  1. ACD4_ACD4 Australian Cattle Dog 12.99
  2. ACD35_ACD35 Australian Cattle Dog 18.84
  3. ACD98_ACD98 Australian Cattle Dog 19.31
  4. 17551_17551 Australian Cattle Dog 19.35
  5. ACD110_ACD110 Australian Cattle Dog 19.46
ACD3_ACD3's breed

ACD3_ACD3 sits in the Australian Cattle Dog cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Australian Cattle Dog 88%
  2. Labrador Retriever 6%
  3. Golden Retriever 6%
Source

From the CanVAS (HaywardDeaf cohort) . Breed-page reference: Australian Cattle Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.487
y -3.871
z 0.220
PCA-256 distance from breed centroid
18.91
Outlier percentile in breed
18
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which ACD3_ACD3 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC22 z = -8.14
  • chr13:14,726,002 loading 0.0284
  • chr3:61,769,626 loading 0.0269
  • chr3:60,881,586 loading -0.0267
PC19 z = 4.94
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC18 z = 3.56
  • chr29:17,473,726 loading 0.0315
  • chr15:28,241,304 loading 0.0312
  • chr15:31,725,606 loading 0.0272
Ancestry reconstruction error: 0.24
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