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CanVAS Cairns · Founder
Cosmic medallion portrait of ASTCD_cd219, a Australian Stumpy Tail Cattle Dog
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

ASTCD_cd219

ASTCD_cd219 is a Australian Stumpy Tail Cattle Dog from the Cairns research cohort. One of 14,478 dogs who built the atlas.

See ASTCD_cd219 in the atlas
About ASTCD_cd219
  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
ASTCD_cd219's nearest neighbors

The five dogs in the atlas whose genomes sit closest to ASTCD_cd219's. Click any of them to keep exploring.

  1. ASTCD_cd218 Australian Stumpy Tail Cattle Dog 8.20
  2. MIXED_cd348 Mix 12.78
  3. MIXED_cd058 Mix 12.92
  4. KELPIE_cd264 Kelpie 13.01
  5. MIXED_cd625 Mix 13.09
ASTCD_cd219's breed

ASTCD_cd219 sits in the Australian Cattle Dog cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Australian Cattle Dog 58%
  2. Labrador Retriever 24%
  3. Golden Retriever 19%
Source

From the CanVAS (Cairns cohort) . Breed-page reference: Australian Stumpy Tail Cattle Dog.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 –
HMGA2 –
SMAD2 –
LCORL G/G
STC2 A/A
ADAMTS17 –
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 –
Coat
RSPO2 C/T
FGF5 –
KRT71 –
MC1R –
Ear set
MSRB3 A/A
Skull shape
BMP3 C/T
SMOC2 –
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.443
y 17.628
z 4.571
Top-3 principal components by |z|

The 3 PCs on which ASTCD_cd219 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC44 z = -4.11
  • chr29:21,886,817 loading 0.0283
  • chr32:36,857,898 loading -0.0278
  • chr37:28,513,334 loading -0.0274
PC45 z = 3.70
  • chr21:49,887,138 loading 0.0323
  • chr14:48,394,398 loading -0.0308
  • chr32:37,683,789 loading -0.0274
PC46 z = -3.17
  • chr22:1,996,400 loading 0.0303
  • chr22:2,231,766 loading 0.0280
  • chr22:3,165,486 loading 0.0275
Ancestry reconstruction error: 0.49
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