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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of CHC_32205_CHC_32205, a Chinese Crested
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

CHC_32205_CHC_32205

CHC_32205_CHC_32205 is a Chinese Crested from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See CHC_32205_CHC_32205 in the atlas
About CHC_32205_CHC_32205

CHC_32205_CHC_32205 sits near the center of the Chinese Crested cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries both copies of the FGF4 chondrodysplasia retrogene - the short-leg variant in Dachshund, Pembroke Corgi, Basset Hound.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
CHC_32205_CHC_32205's nearest neighbors

The five dogs in the atlas whose genomes sit closest to CHC_32205_CHC_32205's. Click any of them to keep exploring.

  1. CHC_25620_CHC_25620 Chinese Crested 17.34
  2. PFZ4D01_PFZ4D01 Chinese Crested 20.64
  3. PFZ25D09_PFZ25D09 Chinese Crested 20.79
  4. PFZ5F09_PFZ5F09 Chinese Crested 21.49
  5. PFZ5C12_PFZ5C12 Chinese Crested 21.66
CHC_32205_CHC_32205's breed

CHC_32205_CHC_32205 sits in the Chinese Crested cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Chinese Crested 72%
  2. Golden Retriever 16%
  3. Labrador Retriever 12%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Chinese Crested.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/A
LCORL G/G
STC2 A/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 T/T
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 C/T
SMOC2 A/A
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 14.312
y 14.159
z 1.020
PCA-256 distance from breed centroid
36.23
Outlier percentile in breed
4
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which CHC_32205_CHC_32205 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC149 z = -5.08
  • chr14:37,146,317 loading 0.0319
  • chr1:49,304,485 loading -0.0313
  • chr1:61,522,946 loading -0.0291
PC145 z = 4.92
  • chr19:19,197,831 loading 0.0370
  • chr1:99,774,502 loading -0.0342
  • chr4:60,708,893 loading 0.0329
PC151 z = 4.64
  • chr8:31,106,810 loading 0.0325
  • chr8:5,470,795 loading -0.0318
  • chr19:36,545,009 loading -0.0310
Ancestry reconstruction error: 0.52
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