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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD17_288_cHD17_288, a Doberman Pinscher
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD17_288_cHD17_288

cHD17_288_cHD17_288 is a Doberman Pinscher from the Momozawa research cohort. One of 14,478 dogs who built the atlas.

See cHD17_288_cHD17_288 in the atlas
About cHD17_288_cHD17_288

cHD17_288_cHD17_288 sits well inside the Doberman Pinscher cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Smooth coat. No wire-furnishings variant at RSPO2.
cHD17_288_cHD17_288's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD17_288_cHD17_288's. Click any of them to keep exploring.

  1. cHD17_285_cHD17_285 Doberman Pinscher 12.17
  2. cHD17_311_cHD17_311 Doberman Pinscher 12.46
  3. cHD17_293_cHD17_293 Doberman Pinscher 13.32
  4. cHD17_289_cHD17_289 Doberman Pinscher 13.37
  5. cHD17_317_cHD17_317 Doberman Pinscher 13.44
cHD17_288_cHD17_288's breed

cHD17_288_cHD17_288 sits in the Doberman Pinscher cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Doberman Pinscher 95%
  2. Labrador Retriever 6%
Source

From the CanVAS (Momozawa cohort) . Breed-page reference: Doberman Pinscher.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 A/G
LCORL A/A
STC2 C/C
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/C
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 G/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.693
y 0.899
z 12.093
PCA-256 distance from breed centroid
22.35
Outlier percentile in breed
42
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD17_288_cHD17_288 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC14 z = -8.59
  • chr2:9,971,173 loading 0.0294
  • chr24:32,514,754 loading -0.0259
  • chr24:20,979,390 loading -0.0251
PC15 z = 6.93
  • chr27:9,604,099 loading 0.0251
  • chr9:58,501,670 loading -0.0250
  • chr9:46,847,361 loading 0.0246
PC16 z = 5.03
  • chr12:35,746,865 loading 0.0308
  • chr23:4,266,972 loading -0.0287
  • chr12:34,964,869 loading 0.0275
Ancestry reconstruction error: 0.20
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