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CanVAS Momozawa · Founder
Cosmic medallion portrait of cHD17_290_cHD17_290, a Doberman Pinscher
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

cHD17_290_cHD17_290

cHD17_290_cHD17_290 is a Doberman Pinscher from the Momozawa research cohort. One of 14,478 dogs who built the atlas.

See cHD17_290_cHD17_290 in the atlas
About cHD17_290_cHD17_290

cHD17_290_cHD17_290 sits near the center of the Doberman Pinscher cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
cHD17_290_cHD17_290's nearest neighbors

The five dogs in the atlas whose genomes sit closest to cHD17_290_cHD17_290's. Click any of them to keep exploring.

  1. cHD17_308_cHD17_308 Doberman Pinscher 18.91
  2. D_32321_D_32321 Doberman Pinscher 19.11
  3. Dob_LU152_Dob_LU152 Doberman Pinscher 19.81
  4. cHD17_297_cHD17_297 Doberman Pinscher 19.90
  5. PFZ13E10_PFZ13E10 Doberman Pinscher 19.93
cHD17_290_cHD17_290's breed

cHD17_290_cHD17_290 sits in the Doberman Pinscher cluster, with genome overlap to Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Doberman Pinscher 89%
  2. Labrador Retriever 6%
  3. Golden Retriever 5%
Source

From the CanVAS (Momozawa cohort) . Breed-page reference: Doberman Pinscher.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/G
LCORL A/A
STC2 C/C
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/C
KRT71 C/C
MC1R T/T
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -4.368
y 0.930
z 11.752
PCA-256 distance from breed centroid
15.51
Outlier percentile in breed
7
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which cHD17_290_cHD17_290 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC14 z = -7.08
  • chr2:9,971,173 loading 0.0294
  • chr24:32,514,754 loading -0.0259
  • chr24:20,979,390 loading -0.0251
PC15 z = 5.93
  • chr27:9,604,099 loading 0.0251
  • chr9:58,501,670 loading -0.0250
  • chr9:46,847,361 loading 0.0246
PC16 z = 4.16
  • chr12:35,746,865 loading 0.0308
  • chr23:4,266,972 loading -0.0287
  • chr12:34,964,869 loading 0.0275
Ancestry reconstruction error: 0.19
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