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CanVAS Shannon · Founder
Cosmic medallion portrait of GoS_LU619_GoS_LU619, a Gordon Setter
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GoS_LU619_GoS_LU619

GoS_LU619_GoS_LU619 is a Gordon Setter from the Shannon research cohort. One of 14,478 dogs who built the atlas.

See GoS_LU619_GoS_LU619 in the atlas
About GoS_LU619_GoS_LU619

GoS_LU619_GoS_LU619 sits well inside the Gordon Setter cluster - a fairly typical example.

  • Predicted giant by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GoS_LU619_GoS_LU619's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GoS_LU619_GoS_LU619's. Click any of them to keep exploring.

  1. GoS_LU633_GoS_LU633 Gordon Setter 19.35
  2. GoS_LU647_GoS_LU647 Gordon Setter 19.92
  3. GoS_LU642_GoS_LU642 Gordon Setter 20.26
  4. GoS_LU604_GoS_LU604 Gordon Setter 20.70
  5. GoS_LU646_GoS_LU646 Gordon Setter 20.77
GoS_LU619_GoS_LU619's breed

GoS_LU619_GoS_LU619 sits in the Gordon Setter cluster, with genome overlap to English Setter, Labrador Retriever, and Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Gordon Setter 78%
  2. English Setter 11%
  3. Labrador Retriever 6%
  4. Golden Retriever 5%
Source

From the CanVAS (Shannon cohort) . Breed-page reference: Gordon Setter.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 T/T
SMAD2 G/G
LCORL A/A
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 3.714
y 4.183
z -7.000
PCA-256 distance from breed centroid
29.17
Outlier percentile in breed
31
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GoS_LU619_GoS_LU619 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC55 z = 6.20
  • chr24:21,414,064 loading 0.0303
  • chr22:46,871,951 loading -0.0285
  • chr34:8,498,060 loading -0.0284
PC54 z = -5.89
  • chr11:65,244,979 loading 0.0313
  • chr10:12,765,718 loading 0.0280
  • chr11:69,039,615 loading 0.0272
PC56 z = -3.56
  • chr4:50,564,575 loading 0.0345
  • chr20:9,086,763 loading 0.0319
  • chr15:1,031,002 loading -0.0297
Ancestry reconstruction error: 0.50
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