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Cosmic medallion portrait of GRLS_grlsFXBOOEEE, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsFXBOOEEE

GRLS_grlsFXBOOEEE is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsFXBOOEEE in the atlas
About GRLS_grlsFXBOOEEE

GRLS_grlsFXBOOEEE sits near the center of the Golden Retriever cluster - genetically very typical for the breed.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
GRLS_grlsFXBOOEEE's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsFXBOOEEE's. Click any of them to keep exploring.

  1. GRLS_grls5IG7YDYY Golden Retriever 22.61
  2. PILOT_grlsCLYGX6JJ Golden Retriever 30.45
  3. PFZ23C02_PFZ23C02 Golden Retriever 31.77
  4. PILOT_grlsT6VMODPP Golden Retriever 32.26
  5. GRLS_grls4PEV98TT Golden Retriever 32.56
GRLS_grlsFXBOOEEE's breed

GRLS_grlsFXBOOEEE sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 75%
  2. Labrador Retriever 25%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 C/C
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 7.832
y 10.641
z 8.079
PCA-256 distance from breed centroid
28.29
Outlier percentile in breed
16
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsFXBOOEEE scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC162 z = -3.23
  • chr6:16,267,511 loading 0.0413
  • chr6:16,208,125 loading 0.0394
  • chr6:17,304,623 loading -0.0387
PC160 z = 2.72
  • chr26:4,196,092 loading 0.0325
  • chr1:1,402,180 loading -0.0321
  • chr17:2,046,668 loading -0.0309
PC115 z = -2.63
  • chr24:13,855,152 loading 0.0360
  • chr24:10,928,728 loading 0.0358
  • chr10:6,396,863 loading -0.0341
Ancestry reconstruction error: 0.52
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