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Cosmic medallion portrait of GRLS_grlsTEW2GPP, a Golden Retriever
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

GRLS_grlsTEW2GPP

GRLS_grlsTEW2GPP is a Golden Retriever from the GRLS research cohort. One of 14,478 dogs who built the atlas.

See GRLS_grlsTEW2GPP in the atlas
About GRLS_grlsTEW2GPP

GRLS_grlsTEW2GPP sits at the edge of the Golden Retriever cluster but still well within it.

  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
GRLS_grlsTEW2GPP's nearest neighbors

The five dogs in the atlas whose genomes sit closest to GRLS_grlsTEW2GPP's. Click any of them to keep exploring.

  1. GRLS_grls3E6Q6J Golden Retriever 29.01
  2. GRLS_grls39MGA8BB Golden Retriever 29.47
  3. Oldies_grls8b626c6b Golden Retriever 29.51
  4. PFZ43E08_PFZ43E08 Golden Retriever 29.77
  5. GRLS_grlsCPOB0399 Golden Retriever 30.05
GRLS_grlsTEW2GPP's breed

GRLS_grlsTEW2GPP sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 79%
  2. Labrador Retriever 21%
Source

From the Golden Retriever Lifetime Study . Breed-page reference: Golden Retriever.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 T/T
SMAD2 G/G
LCORL G/G
STC2 C/A
ADAMTS17 G/G
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 T/T
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 5.167
y 10.580
z 7.635
PCA-256 distance from breed centroid
39.17
Outlier percentile in breed
73
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which GRLS_grlsTEW2GPP scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC43 z = 3.72
  • chr28:11,007,373 loading 0.0365
  • chr28:5,497,677 loading 0.0343
  • chr7:43,226,466 loading 0.0325
PC19 z = -3.52
  • chr36:5,342,283 loading 0.0327
  • chr3:69,391,244 loading 0.0300
  • chr25:17,826,837 loading -0.0278
PC160 z = -3.02
  • chr26:4,196,092 loading 0.0325
  • chr1:1,402,180 loading -0.0321
  • chr17:2,046,668 loading -0.0309
Ancestry reconstruction error: 0.69
Back to the Atlas →