Skip to main content
snıff
CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of KE_24827_KE_24827, a Keeshond
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

KE_24827_KE_24827

KE_24827_KE_24827 is a Keeshond from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See KE_24827_KE_24827 in the atlas
About KE_24827_KE_24827

KE_24827_KE_24827 sits near the center of the Keeshond cluster - genetically very typical for the breed.

  • Predicted medium by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
KE_24827_KE_24827's nearest neighbors

The five dogs in the atlas whose genomes sit closest to KE_24827_KE_24827's. Click any of them to keep exploring.

  1. KE_34857_KE_34857 Keeshond 16.27
  2. PFZ13F11_PFZ13F11 Keeshond 16.46
  3. PFZ12C05_PFZ12C05 Keeshond 16.80
  4. PFZ20D01_PFZ20D01 Keeshond 16.81
  5. PFZ12D06_PFZ12D06 Keeshond 17.09
KE_24827_KE_24827's breed

KE_24827_KE_24827 sits in the Keeshond cluster, with genome overlap to Golden Retriever, and Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Keeshond 86%
  2. Golden Retriever 8%
  3. Labrador Retriever 5%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Keeshond.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/A
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 C/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R T/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 G/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x -0.042
y -4.079
z 9.868
PCA-256 distance from breed centroid
19.47
Outlier percentile in breed
0
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which KE_24827_KE_24827 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC84 z = 11.78
  • chr5:75,426,581 loading 0.0352
  • chr23:35,872,989 loading -0.0350
  • chr16:38,943,549 loading -0.0346
PC88 z = -7.48
  • chr9:17,136,318 loading 0.0333
  • chr18:47,049,795 loading -0.0330
  • chr9:15,299,806 loading -0.0320
PC85 z = -7.16
  • chr10:6,497,921 loading 0.0387
  • chr22:15,428,150 loading -0.0365
  • chr3:1,671,869 loading 0.0347
Ancestry reconstruction error: 0.21
Back to the Atlas →