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CanVAS JenkinsWGS · Founder
Cosmic medallion portrait of NB_12486_NB_12486, a Norwegian Buhund
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

NB_12486_NB_12486

NB_12486_NB_12486 is a Norwegian Buhund from the JenkinsWGS research cohort. One of 14,478 dogs who built the atlas.

See NB_12486_NB_12486 in the atlas
About NB_12486_NB_12486
  • Predicted large by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Standard leg length. No chondrodysplasia retrogene variant.
  • Carrier of the RSPO2 wire-coat variant (single copy).
NB_12486_NB_12486's nearest neighbors

The five dogs in the atlas whose genomes sit closest to NB_12486_NB_12486's. Click any of them to keep exploring.

  1. NB_12485_NB_12485 Norwegian Buhund 9.23
  2. NB_29650_NB_29650 Norwegian Buhund 18.73
  3. PFZ4E02_PFZ4E02 Icelandic Sheepdog 33.16
  4. PFZ21B07_PFZ21B07 Icelandic Sheepdog 33.33
  5. PFZ1F10_PFZ1F10 Peruvian Inca Orchid 34.41
NB_12486_NB_12486's breed

NB_12486_NB_12486 sits in the Golden Retriever cluster, with genome overlap to Labrador Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. Golden Retriever 53%
  2. Labrador Retriever 47%
Source

From the CanVAS (JenkinsWGS cohort) . Breed-page reference: Norwegian Buhund.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 C/C
HMGA2 C/C
SMAD2 A/G
LCORL G/G
STC2 A/A
ADAMTS17 A/A
Leg length
FGF4·CFA18 C/C
FGF4·CFA12 C/C
Coat
RSPO2 C/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.430
y 1.349
z 1.905
Top-3 principal components by |z|

The 3 PCs on which NB_12486_NB_12486 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC218 z = 3.85
  • chr7:62,094,557 loading 0.0330
  • chr17:4,233,511 loading -0.0324
  • chr28:21,567,516 loading 0.0320
PC239 z = 3.57
  • chr26:2,885,742 loading 0.0312
  • chr11:18,600,601 loading 0.0306
  • chr1:62,634,942 loading 0.0302
PC223 z = 3.55
  • chr7:43,046,169 loading 0.0391
  • chr13:1,840,654 loading 0.0338
  • chr22:3,486,881 loading -0.0327
Ancestry reconstruction error: 0.79
Back to the Atlas →