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CanVAS Hayward2016 · Founder
Cosmic medallion portrait of PFZ1F10_PFZ1F10, a Peruvian Inca Orchid
AI portrait
About this portrait

This portrait was algorithmically built from this dog's genome: their genotype at 8 morphology loci (coat length, curl, color, ear set, body size, head shape, skull, furnishings) plus their position within the 14,478-dog atlas. The same dog always reproduces the same portrait. A different dog with different alleles gets a different portrait.

PFZ1F10_PFZ1F10

PFZ1F10_PFZ1F10 is a Peruvian Inca Orchid from the Hayward2016 research cohort. One of 14,478 dogs who built the atlas.

See PFZ1F10_PFZ1F10 in the atlas
About PFZ1F10_PFZ1F10

PFZ1F10_PFZ1F10 sits near the center of the Peruvian Inca Orchid cluster - genetically very typical for the breed.

  • Predicted small by the six body-size genes the atlas reads (IGF1, HMGA2, SMAD2, LCORL, STC2, ADAMTS17).
  • Carries one copy of the FGF4 chondrodysplasia retrogene.
  • Wire-coat furnishings - the eyebrow + beard variant at RSPO2.
PFZ1F10_PFZ1F10's nearest neighbors

The five dogs in the atlas whose genomes sit closest to PFZ1F10_PFZ1F10's. Click any of them to keep exploring.

  1. CO32_CO32 Village Dog Colombia 19.27
  2. PFZ1H12_PFZ1H12 Village Dog Peru Cusco 19.73
  3. PFZ2H08_PFZ2H08 Peruvian Inca Orchid 20.04
  4. PFZ2F03_PFZ2F03 Village Dog Peru Cusco 20.12
  5. PFZ2A10_PFZ2A10 Village Dog Peru Cusco 20.13
PFZ1F10_PFZ1F10's breed

PFZ1F10_PFZ1F10 sits in the German Shepherd cluster, with genome overlap to Golden Retriever - sister breeds nearby in the atlas.

Breed similarity from non-negative least squares against 91 breed centroids in PCA-256 space, corrected for atlas sample-size imbalance. Without correction, Goldens (22% of the atlas) leak into every dog's raw NNLS breakdown; with it, the bias falls out. Raw fractions stay in the dataset for re-derivation. Methodology.

  1. German Shepherd 73%
  2. Golden Retriever 27%
Source

From the CanVAS (Hayward2016 cohort) . Breed-page reference: Peruvian Inca Orchid.

Full genotype detail
click to expand

The actual allele call at each locus's representative SNP for this dog. Each gene name links to its page where you can see the per-breed frequency table and the direction of effect.

Body size
IGF1 A/A
HMGA2 C/C
SMAD2 A/G
LCORL A/G
STC2 A/A
ADAMTS17 G/A
Leg length
FGF4·CFA18 T/C
FGF4·CFA12 T/C
Coat
RSPO2 T/T
FGF5 C/C
KRT71 C/C
MC1R C/C
Ear set
MSRB3 A/A
Skull shape
BMP3 T/T
SMOC2 A/G
Technical details
click to expand

The numbers behind the placement. Useful for researchers reproducing the math or debugging an unexpected position; not interesting to most readers.

UMAP-3D position
x 4.258
y 1.521
z 1.782
PCA-256 distance from breed centroid
35.41
Outlier percentile in breed
0
lower = more typical
Top-3 principal components by |z|

The 3 PCs on which PFZ1F10_PFZ1F10 scores most extreme, with the 3 highest-loading SNPs on each. Foundation for the future genome-ring visualization.

PC192 z = 1.33
  • chr25:28,817,053 loading 0.0428
  • chr25:4,418,784 loading 0.0393
  • chr25:26,660,651 loading 0.0386
PC173 z = -1.21
  • chr17:4,173,842 loading 0.0406
  • chr17:4,233,511 loading 0.0400
  • chr17:4,353,120 loading 0.0343
PC195 z = -1.19
  • chr17:4,173,842 loading 0.0436
  • chr17:4,233,511 loading 0.0413
  • chr17:4,128,965 loading 0.0412
Ancestry reconstruction error: 0.56
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